Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., Serine endoprotease DegS precursor from Alteromonas macleodii MIT1002

 Score =  236 bits (603), Expect = 5e-67
 Identities = 146/362 (40%), Positives = 209/362 (57%), Gaps = 30/362 (8%)

Query: 1   MLKFWVRSISLGLLAAIAIIMVTPSLRAK--LMPVVEQPRNIGALQISFNEAVRKAAPAV 58
           +  F ++S+ LG+  A  +++  P LR    L        ++ A + S+  A+ ++APAV
Sbjct: 6   IFNFLLKSVFLGVAVAALLLVFLPDLRQGKGLAQGFFNSPSVSASRESYFTALSRSAPAV 65

Query: 59  VNIYNRKYSEND----RRKLSIQGLGSGVIVSEKGYIITNYHVVAQADQIVVALQDGRAA 114
           VNIY+            +      LGSGVI++E GY++T +HVVA AD I VA+QDGR  
Sbjct: 66  VNIYSVSIENGSGLFRNQSRGRTNLGSGVIMTENGYLLTCHHVVADADSIYVAVQDGRIL 125

Query: 115 AAQLVGKDRRTDIAVLRVEGTGLPVIPL--NPDYHPKVGDVVLAIGNPYNLGQTTTFGII 172
            AQ+VG D  TD+AVL+V    L +IP    PD H  VGDVV+AIGNP++LGQT T GI+
Sbjct: 126 EAQIVGTDPLTDLAVLKVTADNLHIIPQVSEPDTH--VGDVVMAIGNPFDLGQTITQGIV 183

Query: 173 SATGRSSISADGRQAFIQTDAAINDGNSGGALVNTQGELVGINTASFQ------QATDLE 226
           S  GR+ +S      FIQTDA +N GNSGGALV++ G L+GI  A+FQ      +A +++
Sbjct: 184 SRAGRNGLS--NYVDFIQTDAVLNQGNSGGALVDSNGILLGITNANFQVLDSNNRARNVD 241

Query: 227 TYGISFAIPYSLASKIMTKIIADGRVIRGYIGVDGQDINSMTSRLLGNEHVGGIIILGVD 286
             GI+FA+PY LA ++M +II++GRV+RG +G  G +          N +  GI +  V 
Sbjct: 242 --GINFAVPYELAKRVMDEIISNGRVVRGQLGFVGGE----------NRNRPGIDVSAVA 289

Query: 287 PNGPAARAGFLEQDILLKIDGKKINGRQNVTDTVTDLRPGTVVDFTLLRKGEEIVLPVTI 346
              PA  AG    DI++ IDG ++       D + +  PGT ++  L R G  I L  T+
Sbjct: 290 KGSPADIAGIRPGDIIVAIDGVRLESASKTLDMIAETEPGTELEIELSRDGRSITLTATV 349

Query: 347 GE 348
            E
Sbjct: 350 AE 351