Pairwise Alignments

Query, 352 a.a., outer membrane-stress sensor serine endopeptidase DegS from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., htrA family protein from Agrobacterium fabrum C58

 Score =  191 bits (486), Expect = 3e-53
 Identities = 127/362 (35%), Positives = 190/362 (52%), Gaps = 27/362 (7%)

Query: 6   VRSISLGLLAAIAIIMVTPSLRAKLMPVVEQPRNIGALQISFNEAVRKAAPAVVNIYNRK 65
           ++ +S G LAA+ ++ V    RA+    V  P +   +Q+SF   V++ A AVVN+Y  +
Sbjct: 5   LKYLSTGFLAALVLLPV--GARAQDNKTV--PASHTEMQLSFAPLVKRTAGAVVNVYAER 60

Query: 66  YSEN-------------------DRRKLSIQGLGSGVIVSEKGYIITNYHVVAQADQIVV 106
             +                      R      LGSGVIV+  G ++TN HV+  AD I V
Sbjct: 61  VVQRRVSPFAGDPFFEQFFGQQMPNRTEKQSSLGSGVIVTAGGLVVTNNHVIDGADDIKV 120

Query: 107 ALQDGRAAAAQLVGKDRRTDIAVLRVEGTG-LPVIPLNPDYHPKVGDVVLAIGNPYNLGQ 165
           AL DGR  +++++ KD R D+AVL+++     PV+ L      +VGD+VLAIGNP+ +GQ
Sbjct: 121 ALADGREFSSKVLMKDDRVDLAVLQIDAKEQFPVLSLGDSDKIEVGDLVLAIGNPFGVGQ 180

Query: 166 TTTFGIISATGRSSISADGRQAFIQTDAAINDGNSGGALVNTQGELVGINTASFQQATDL 225
           T T GI+S   R+ ++      FIQTDA+IN GNSGGAL+N  GELVGINTA F +    
Sbjct: 181 TVTSGIVSGLARNQVTQGDFGFFIQTDASINPGNSGGALMNMAGELVGINTAIFSKGGG- 239

Query: 226 ETYGISFAIPYSLASKIMTKI-IADGRVIRGYIGVDGQDINSMTSRLLGNEHVGGIIILG 284
            + GI FAIP +L    +      D    R YIG     + S  +  LG     G +++G
Sbjct: 240 -SNGIGFAIPANLVRVFVAAAERGDANFQRPYIGATFDPVTSDVAEALGLHRARGALVVG 298

Query: 285 VDPNGPAARAGFLEQDILLKIDGKKINGRQNVTDTVTDLRPGTVVDFTLLRKGEEIVLPV 344
           V   GPA +AG     ++  ++G ++     +   +T    G   + T++ KG+E  L +
Sbjct: 299 VTKGGPAEKAGIEPGQVVTAVNGLEVEHPDALGYRLTTAGIGKSAELTVVEKGKEKKLTI 358

Query: 345 TI 346
            +
Sbjct: 359 AL 360



 Score = 35.0 bits (79), Expect = 4e-06
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 6/96 (6%)

Query: 249 DGRVIRGYIGVDGQDINSMTSRLLGN----EHVGGIIILGVDPNGPAARAGFLEQDILLK 304
           D R++ G     G  + +++ +L         V G++I  V    PA R GF  +D++L 
Sbjct: 370 DERLLEGRNPFAGATVANLSPKLADELRMPSQVTGVVITDVKRGSPAYRVGFQPKDVILS 429

Query: 305 IDGKKINGRQNVTDTVTDLRPGTVVDFTLLRKGEEI 340
           ++G  I G     +   D  PG      +LR G+ I
Sbjct: 430 LNGADI-GSTAAVEKALDDNPG-FWRVEILRDGQRI 463