Pairwise Alignments

Query, 247 a.a., tRNA (guanosine(37)-N1)-methyltransferase TrmD from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  210 bits (535), Expect = 2e-59
 Identities = 108/231 (46%), Positives = 152/231 (65%), Gaps = 11/231 (4%)

Query: 5   IVSLFPEMFRSVTDFGVTGQAVKKGLLSVEAWNPRDFAHDKRRTVDDKPYGGGPGMLMMV 64
           +++LFPE+F      G+  +A + G ++V  WNPRDFA    R VDD+P+GGGPGM+MM 
Sbjct: 5   VITLFPELFAPFLQHGINRRAFESGQVAVHLWNPRDFAEGNYRRVDDRPFGGGPGMVMMA 64

Query: 65  QPLRDAIHAAK----QASPGKTKVIYLSPQGRKLDQQGVEELAQNQNLILICGRYEGVDE 120
           +PL   + A +    +A   +  V+  SP G  L+  GVE  +++Q  +L+CGRYEG+D+
Sbjct: 65  EPLWQCLQAIRAERAEADDARAPVVLFSPIGDTLNHTGVEGWSRSQGAVLVCGRYEGIDQ 124

Query: 121 RIIESEVDEEWSIGDFVMTGGELPAMTLIDSVSRFIPGVLGDFASAEEDSF---ANGLLD 177
           R I++ VD + S+GDFV++GGE+ AM L+D+V+R  PGVL D  S ++DSF    +GLLD
Sbjct: 125 RFIDTCVDRQISLGDFVLSGGEIAAMALLDAVARLQPGVLTDEGSHQQDSFNPALDGLLD 184

Query: 178 CPHYTRPEVLDGKE----VPAVLKSGNHEDIRRWRLKQSLGRTWLRRPELL 224
            PH+TRPEV  G +    VP VL  G+HE I R R +QSL  T  RRP+LL
Sbjct: 185 SPHHTRPEVWQGPQGPIGVPEVLLGGHHERIARHRREQSLLLTASRRPDLL 235