Pairwise Alignments

Query, 184 a.a., ribosome maturation factor RimM from Vibrio cholerae E7946 ATCC 55056

Subject, 164 a.a., 16S rRNA processing protein RimM from Sphingobium sp. HT1-2

 Score = 40.8 bits (94), Expect = 1e-08
 Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 4/121 (3%)

Query: 24  SYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGEWVEYKVEGWKRHNKGWVVKLQGLDVRE 83
           ++G+ G +++  + +  E++  Y  +  D  G  +  K    +    G V +   +  R 
Sbjct: 14  AHGVAGEVRLKLFGEGAEALKSYKSF--DAAGRTLTLK--SVRPGPNGAVARFAEIGDRG 69

Query: 84  DAHLLTNFEIAIDPASLPELSEDEFYWRELFGMQVVTTNGYDLGVVTDMMETGSNDVLVV 143
            A  L    + +  ++LP LSE E+Y  +L G+   ++ G  LG +  +   G+ D++ V
Sbjct: 70  AAEALRGTALTVPRSALPALSEGEYYHADLVGLPCTSSTGETLGEIIAVENFGAGDIIEV 129

Query: 144 K 144
           +
Sbjct: 130 Q 130