Pairwise Alignments

Query, 184 a.a., ribosome maturation factor RimM from Vibrio cholerae E7946 ATCC 55056

Subject, 176 a.a., 16S rRNA processing protein RimM from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 53.5 bits (127), Expect = 2e-12
 Identities = 37/160 (23%), Positives = 78/160 (48%), Gaps = 8/160 (5%)

Query: 18  VGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGEWVEYKVEGW-KRHNKGWVVKL 76
           +G +   +G++G +      D PE+  D    ++++      Y +E +  + N  ++ K 
Sbjct: 9   LGYIAKVHGLQGEVVAVLDVDYPENYEDIEHVFLEKNNRLAPYFLEHFVSQPNNRFLAKF 68

Query: 77  QGLDVREDAHLLTNFEIAIDPASLPELSEDEFYWRELFGMQVVTTNGYDLGVVTDMMETG 136
           +G D +  A  L    + +    LP L +D++Y+ EL G +V   +   LG V ++ +  
Sbjct: 69  EGYDDKNAADTLVGTALYLPLKDLPALEDDQYYYHELVGFEVEDASKGVLGSVKEIYDLQ 128

Query: 137 SNDVLVVKANLKDAFGQKERLIPFLEEQVIKVVDRQAQRI 176
           +  +L +       +  KE LIP +++ +I  VD+ A+++
Sbjct: 129 TQYLLGLD------YQGKEILIP-IQDDIILKVDKAAKKV 161