Pairwise Alignments

Query, 184 a.a., ribosome maturation factor RimM from Vibrio cholerae E7946 ATCC 55056

Subject, 179 a.a., 16S rRNA processing protein from Agrobacterium fabrum C58

 Score = 78.6 bits (192), Expect = 6e-20
 Identities = 51/164 (31%), Positives = 91/164 (55%), Gaps = 11/164 (6%)

Query: 18  VGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGEWVEYKVEGWKRHNKGWVVKLQ 77
           + K+G + G+RG ++V +YTD+P ++ DY    +   G    +++   +      VV+ +
Sbjct: 1   MAKIGGAQGLRGEVRVSTYTDDPMALGDYGN-LVTADGR--VFEILEVREGKNVVVVRFR 57

Query: 78  GLDVREDAHLLTNFEIAIDPASLP--ELSEDEFYWRELFGMQVVTTNGYDLGVVTDMMET 135
           G++ R  A  L   E+ I+  +LP  EL +DEFY+ +L G++ V   G   G V+ + + 
Sbjct: 58  GINDRNAAESLNGLELFIERDNLPDDELDDDEFYYADLEGLEAVDAEGKSYGAVSAVYDF 117

Query: 136 GSNDVLVVKANLKDAFGQKERLIPFLEEQVIKVVDRQAQRIEVD 179
           G+ D+L +K       G++  LIPF E  V++ +D +A RI +D
Sbjct: 118 GAGDLLELK-----GAGRRPALIPFSEAAVLE-IDLEAGRILID 155