Pairwise Alignments

Query, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., cell division protein FtsY from Pseudomonas simiae WCS417

 Score =  147 bits (372), Expect = 5e-40
 Identities = 102/298 (34%), Positives = 152/298 (51%), Gaps = 17/298 (5%)

Query: 2   FENLTDRLSKTLKNISGKGR----LTEDNIKDTLRE-VRMALLEADVALPVVRDFVNRVK 56
           F  L   LSKT  +I G+G     L +  I D L E +   LL ADV +      +  + 
Sbjct: 157 FARLKQGLSKTSASI-GEGMASLFLGKKVIDDELLEDIETRLLTADVGVEATAVIIQSLT 215

Query: 57  EGAVGVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTS 116
           +        K LT      K ++ +L A++      L +  + P VIL+ G+ GAGKTT+
Sbjct: 216 QKVA----RKQLTDADALYKSLQAELAAMLKPVEAPLVITPKKPFVILVVGVNGAGKTTT 271

Query: 117 VGKLSKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAAI 176
           +GKL+K L+  + KKV++ + D +R AA++QL+       +             +   A+
Sbjct: 272 IGKLAKKLQS-EGKKVMLAAGDTFRAAAVEQLQVWGERNKIPVIAQHTGADSASVIFDAV 330

Query: 177 DHAKKKFYDVLIVDTAGRLAIDEQMMAEIQALHKAIN------PVETLFVVDAMTGQDAA 230
             AK +  DVLI DTAGRL   + +M E++ + + I       P E L V+DA TGQ+A 
Sbjct: 331 QAAKARNIDVLIADTAGRLHTKDNLMEELKKVRRVIGKLDADAPHEVLLVLDAGTGQNAI 390

Query: 231 DTAKAFGDALPLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPD 288
             AK F   + LTG+ LTK+DG A+GG   ++    G PI++IGVGE  D L  F  +
Sbjct: 391 SQAKQFNQTVQLTGLALTKLDGTAKGGVIFALAKQFGLPIRYIGVGEGIDDLRTFEAE 448