Pairwise Alignments

Query, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., signal recognition particle-docking protein FtsY from Vibrio cholerae E7946 ATCC 55056

 Score =  148 bits (373), Expect = 4e-40
 Identities = 96/297 (32%), Positives = 154/297 (51%), Gaps = 21/297 (7%)

Query: 2   FENLTDRLSKTLKNISG------KGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRV 55
           F  L   LS+T  NI        KG+  +D++ + L E    LL ADV +    D  +++
Sbjct: 89  FARLKRSLSRTKANIGAGFFGLFKGKKIDDDLFEELEE---QLLIADVGM----DTTSKI 141

Query: 56  KEGAVGVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQP-PAVILMAGLQGAGKT 114
                     + L  G+    ++++++  ++ +  + L +  +  P VILM G+ G GKT
Sbjct: 142 IANLTARASRQQLRDGEALYGLLKEEMAEILSQVEQPLVIDTEKKPYVILMVGVNGVGKT 201

Query: 115 TSVGKLSKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANA 174
           T++GKL+K  + + KK V++ + D +R AA++QL+       V             +   
Sbjct: 202 TTIGKLAKQFQAQGKK-VMLAAGDTFRAAAVEQLQVWGERNQVPVIAQHTGADSASVIYD 260

Query: 175 AIDHAKKKFYDVLIVDTAGRLAIDEQMMAEIQALHKAIN------PVETLFVVDAMTGQD 228
           AI+ AK +  DV+I DTAGRL     +M E++ + + +       P E +  +DA TGQ+
Sbjct: 261 AIEAAKARGIDVVIADTAGRLQNKSNLMEELRKIVRVMKKIDDSAPHEIMLTLDAGTGQN 320

Query: 229 AADTAKAFGDALPLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPF 285
           A   AK F D  P+TG+ LTK+DG A+GG   ++      PI++IGVGEK D L PF
Sbjct: 321 AISQAKLFSDVAPITGITLTKLDGTAKGGVIFAIADQFQIPIRYIGVGEKIDDLRPF 377