Pairwise Alignments

Query, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., Signal recognition particle protein Ffh from Sphingobium sp. HT1-2

 Score =  448 bits (1153), Expect = e-130
 Identities = 234/458 (51%), Positives = 317/458 (69%), Gaps = 7/458 (1%)

Query: 1   MFENLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRVKEGAV 60
           MF++L+DRL      + G+G LTED+++  +REVR+ALLEADVALPVVR FV++  E AV
Sbjct: 1   MFDSLSDRLGGVFDKLRGRGALTEDDVRAAMREVRVALLEADVALPVVRQFVDQATEKAV 60

Query: 61  GVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL 120
           G +V +S+TPGQ  +KIV   L   +G     L +   PPAVI+M GLQG+GKTTS  K+
Sbjct: 61  GSDVLRSITPGQMVVKIVSDTLTETLGAETSDLLIDVTPPAVIMMVGLQGSGKTTSTAKI 120

Query: 121 SKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAAIDHAK 180
           +K LK++++KKVL+ S DV RPAA +QL  L   + V   P    Q+P+DIA  A+  AK
Sbjct: 121 AKRLKDKERKKVLMASLDVQRPAAQEQLAVLGTQIDVATLPIVAGQQPVDIAKRALQSAK 180

Query: 181 KKFYDVLIVDTAGRLAIDEQMMAEIQALHKAINPVETLFVVDAMTGQDAADTAKAFGDAL 240
            + +DV+++DTAGRL +D+ +M E++A+    NP E L VVD++TGQDA + A +F   +
Sbjct: 181 LQGFDVVMLDTAGRLHVDQALMDEMKAVADVANPAEILLVVDSLTGQDAVNVATSFTAQV 240

Query: 241 PLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPDRIASRILGMGDV 300
           PLTGV+LT++DGDARGGAALS+R +TG+PIKF G GEK DALEPFHP R+A RILGMGDV
Sbjct: 241 PLTGVVLTRMDGDARGGAALSMRAVTGRPIKFAGTGEKLDALEPFHPARVAQRILGMGDV 300

Query: 301 LSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGMLDKLPGMSQL 360
           +SL+E     +D E+A+KLAKK   K  FD+ D R QL QM+ MGG+  +   LPG+ + 
Sbjct: 301 VSLVEKAAETIDAEEADKLAKKM-AKGQFDMNDLRSQLNQMRRMGGLGALAGMLPGLKKA 359

Query: 361 PADMKDK-VDDRVFKQMEAIINSMTMKERQNPDLIKGSRKKRIAAGSGTQVQDVNRLLKQ 419
            A M +   +D+    ++A+I SMT KER+ P LI   RK RIA G+G  VQDVNRLLK 
Sbjct: 360 QAAMANSGANDKTLLHLDAMIGSMTPKEREKPALINAKRKIRIAKGAGRTVQDVNRLLKM 419

Query: 420 FTQMQKMMKKMQQ-GGMKGMMRNMQGLMGGGGRGGFGG 456
             +M+  MKK+++ GG+KG+ +    +  GGG GG GG
Sbjct: 420 HQEMETAMKKIRKMGGLKGLAK----MFTGGGMGGLGG 453