Pairwise Alignments

Query, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., Signal Recognition Particle protein translocation receptor GTPase from Pseudomonas putida KT2440

 Score =  150 bits (379), Expect = 9e-41
 Identities = 104/313 (33%), Positives = 159/313 (50%), Gaps = 24/313 (7%)

Query: 2   FENLTDRLSKTLKNISGKG--------RLTEDNIKDTLREVRMALLEADVALPVVRDFVN 53
           F  L   LSKT  +I G+G        ++ +D++ D   E+   LL ADV +      V 
Sbjct: 191 FARLKQGLSKTSASI-GEGMASLFLGKKVIDDDLLD---EIETRLLTADVGVEATSAIVQ 246

Query: 54  RVKEGAVGVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQ-PPAVILMAGLQGAG 112
            + +        K L       K ++++L A++    + LN+ AQ  P VIL+ G+ GAG
Sbjct: 247 NLTQKVA----RKQLADADALYKSLQEELAALLRPVEQPLNVQAQNKPYVILVVGVNGAG 302

Query: 113 KTTSVGKLSKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIA 172
           KTT++GKL+K L + + KKV++ + D +R AA++QL+       +             + 
Sbjct: 303 KTTTIGKLAKKL-QLEGKKVMLAAGDTFRAAAVEQLQVWGERNQIPVIAQHTGADSASVI 361

Query: 173 NAAIDHAKKKFYDVLIVDTAGRLAIDEQMMAEIQALHKAIN------PVETLFVVDAMTG 226
             A+  AK +  DVLI DTAGRL   + +M E++ + + I       P E L V+DA TG
Sbjct: 362 FDAVQAAKARGVDVLIADTAGRLHTKDNLMEELKKVRRVIGKLDVEAPHEVLLVLDAGTG 421

Query: 227 QDAADTAKAFGDALPLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFH 286
           Q+A   AK F  ++ LTG+ LTK+DG A+GG   ++      PI+FIGVGE  D L  F 
Sbjct: 422 QNAISQAKYFNQSVELTGLALTKLDGTAKGGVIFALAKQFNIPIRFIGVGEGIDDLRTFE 481

Query: 287 PDRIASRILGMGD 299
            +     +    D
Sbjct: 482 AEPFVKALFAERD 494