Pairwise Alignments

Query, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., GTPase component of the signal recognition particle (SRP) from Pseudomonas putida KT2440

 Score =  635 bits (1639), Expect = 0.0
 Identities = 328/454 (72%), Positives = 383/454 (84%), Gaps = 4/454 (0%)

Query: 1   MFENLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRVKEGAV 60
           MFENLTDRLS+TL++++GK +LTEDNIKDTLREVRMALLEADVALPVV+DFVN VK+ AV
Sbjct: 1   MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKDRAV 60

Query: 61  GVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL 120
           G EVS+SLTPGQ F+KIV+ +LE++MG +NE L L A PPAV+LMAGLQGAGKTT+ GKL
Sbjct: 61  GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLALNAAPPAVVLMAGLQGAGKTTTAGKL 120

Query: 121 SKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAAIDHAK 180
           ++ LKER KK V+VVSADVYRPAAIKQLETLAND+GV FFPS   QKP+ IA AAI  AK
Sbjct: 121 ARFLKERKKKSVMVVSADVYRPAAIKQLETLANDIGVTFFPSDISQKPVAIAEAAIREAK 180

Query: 181 KKFYDVLIVDTAGRLAIDEQMMAEIQALHKAINPVETLFVVDAMTGQDAADTAKAFGDAL 240
            KF DV+IVDTAGRL ID  MM EI+ALH A+ P+ETLFVVDAMTGQDAA+TAKAFG+AL
Sbjct: 181 LKFIDVVIVDTAGRLHIDADMMDEIKALHAAVKPIETLFVVDAMTGQDAANTAKAFGEAL 240

Query: 241 PLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPDRIASRILGMGDV 300
           PLTGV+LTKVDGDARGGAALSVR ITGKPIKFIG+GEKT+ALEPFHPDR+ASRILGMGDV
Sbjct: 241 PLTGVVLTKVDGDARGGAALSVRAITGKPIKFIGMGEKTEALEPFHPDRVASRILGMGDV 300

Query: 301 LSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGMLDKLPGMSQL 360
           LSLIE  ++ +D+ KA+KLAKK K+ KGFDLEDFR+QL QMKNMGG+ G++DKLP +  +
Sbjct: 301 LSLIEQAEQTIDKAKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPSIGGV 360

Query: 361 PADMKDKVD---DRVFKQMEAIINSMTMKERQNPDLIKGSRKKRIAAGSGTQVQDVNRLL 417
                       ++ FKQMEAIINSMT  ER++PDLI GSRK+RIA GSGTQVQD+ RL+
Sbjct: 361 NLSQMGNAQGAAEKQFKQMEAIINSMTPAERRDPDLISGSRKRRIALGSGTQVQDIGRLI 420

Query: 418 KQFTQMQKMMKKMQ-QGGMKGMMRNMQGLMGGGG 450
           KQ  QMQKMMKK   +GGM  MMR + G++ GGG
Sbjct: 421 KQHKQMQKMMKKFSAKGGMAKMMRGLGGMLPGGG 454