Pairwise Alignments

Query, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., signal recognition particle protein from Magnetospirillum magneticum AMB-1

 Score =  474 bits (1221), Expect = e-138
 Identities = 248/455 (54%), Positives = 333/455 (73%), Gaps = 4/455 (0%)

Query: 1   MFENLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRVKEGAV 60
           MFE+L+ RL K  + ++G+G L+E ++ D LREVR+ALLEADVAL VV++F+ RVK  AV
Sbjct: 1   MFESLSSRLGKVFEKLTGRGALSEADVTDALREVRVALLEADVALSVVKEFIGRVKARAV 60

Query: 61  GVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL 120
           G EV KS++PGQ  +KIV  +L A +G     LNL+A PP VILM GLQG+GKTT+  K+
Sbjct: 61  GAEVIKSVSPGQMVVKIVHDELIATLGTKGTELNLSAVPPVVILMVGLQGSGKTTTSAKI 120

Query: 121 SKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAAIDHAK 180
           +  LK ++KKKVL+ S DVYRPAA +QL+ LA    V   P    + P+ I+  A+D  +
Sbjct: 121 ALKLK-KEKKKVLLASLDVYRPAAQQQLQILAGQAEVGSLPIVMGEMPVAISKRALDVGR 179

Query: 181 KKFYDVLIVDTAGRLAIDEQMMAEIQALHKAINPVETLFVVDAMTGQDAADTAKAFGDAL 240
           K+ YDV+I+DTAGRL ID+++MAE+ A+  A  P ETL V DAM GQDA   A+ F + +
Sbjct: 180 KEGYDVVILDTAGRLHIDQELMAEVAAVRDAAKPTETLLVTDAMVGQDAVTLAREFNEKV 239

Query: 241 PLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPDRIASRILGMGDV 300
            +TG++LT++DGDARGGAALS+R ITG+PIKF+G GEK DALE FHPDRIA RILGMGDV
Sbjct: 240 GVTGIVLTRIDGDARGGAALSMRAITGRPIKFLGAGEKLDALEVFHPDRIAGRILGMGDV 299

Query: 301 LSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGMLDKLPGMSQL 360
           + L+E     +DQE+AE+LAK+  EK  FDL+D R+Q  Q++ MG + G+L  LPG+ ++
Sbjct: 300 VGLVEKAMETLDQEEAERLAKRM-EKGKFDLDDMRKQFAQVRKMGDLKGILGMLPGIGKM 358

Query: 361 PADMKD-KVDDRVFKQMEAIINSMTMKERQNPDLIKGSRKKRIAAGSGTQVQDVNRLLKQ 419
              +KD  +D+++  + EAII SMT  ER+NPDLIK SRKKRIAAG+G +VQDVN+LLKQ
Sbjct: 359 AGALKDANIDNKMVARQEAIITSMTKAERRNPDLIKASRKKRIAAGAGVEVQDVNKLLKQ 418

Query: 420 FTQMQKMMKKMQQGGMKGMMRN-MQGLMGGGGRGG 453
           + QM  MMKK+ + G KG+MR+ + GL+  G + G
Sbjct: 419 YQQMADMMKKVGKLGQKGLMRHGIGGLLPPGMKFG 453