Pairwise Alignments

Query, 461 a.a., signal recognition particle protein from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., Signal Recognition Particle (SRP) receptor from Escherichia coli BL21

 Score =  163 bits (412), Expect = 1e-44
 Identities = 101/310 (32%), Positives = 160/310 (51%), Gaps = 20/310 (6%)

Query: 2   FENLTDRLSKTLKNISG------KGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRV 55
           F  L   L KT +N+        +G+  +D++ + L E    LL ADV +   R  +  +
Sbjct: 197 FARLKRSLLKTKENLGSGFISLFRGKKIDDDLFEELEE---QLLIADVGVETTRKIITNL 253

Query: 56  KEGAVGVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQPPAVILMAGLQGAGKTT 115
            EGA      K L   +    ++++++  ++ + +E LN+  + P VILM G+ G GKTT
Sbjct: 254 TEGAS----RKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKTPFVILMVGVNGVGKTT 309

Query: 116 SVGKLSKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAA 175
           ++GKL++   E+  K V++ + D +R AA++QL+       +             +   A
Sbjct: 310 TIGKLARQF-EQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDA 368

Query: 176 IDHAKKKFYDVLIVDTAGRLAIDEQMMAEIQALHKAIN------PVETLFVVDAMTGQDA 229
           I  AK +  DVLI DTAGRL     +M E++ + + +       P E +  +DA TGQ+A
Sbjct: 369 IQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNA 428

Query: 230 ADTAKAFGDALPLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPDR 289
              AK F +A+ LTG+ LTK+DG A+GG   SV    G PI++IGVGE+ + L PF  D 
Sbjct: 429 VSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADD 488

Query: 290 IASRILGMGD 299
               +    D
Sbjct: 489 FIEALFARED 498