Pairwise Alignments

Query, 264 a.a., inner membrane protein YpjD from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score = 58.2 bits (139), Expect = 2e-13
 Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 22/229 (9%)

Query: 48  WLLSDLILHSSGQNLSILNVASLISFIISLAM--SLAMFKTRLWFLLPVAYSFSAINLSA 105
           W LS +     GQ  + L+ A  +S   + A+  +LA    + W L P+   F A     
Sbjct: 46  WALSLM----GGQWQTSLSAALWVSIAATAALFAALAQASAQGWRLAPLLMPFLA----- 96

Query: 106 ATFLPGTFITHLESDPKLL---------LHISLALFSYSTLSIGALYALQLAWLDHKLKS 156
           A  L  + +  +E+  ++          LHI +++ +Y+ L++ A+ +L     +  LK 
Sbjct: 97  ALGLLASLVQWVEAPSQMSGAVPAAWLDLHIVVSVLTYALLTLAAVASLATFLQERALKR 156

Query: 157 KKVFSINPNLPPLLLVERQLFKIILIGNLLLTGTLLTGFI--FVQDMFAQGKAHKGILSF 214
           K    +   LP +   E    +++L    +L   L TG    + +       +HK +LS 
Sbjct: 157 KAPTQLTRMLPSVADSEGLAGRLLLASEAVLGLGLATGMATQYFETGTVLALSHKILLSL 216

Query: 215 VAWIVYSILLWGHYRKGWRGKKVTWFAVAGATLLTLAYFGSRFVREIIL 263
           +A+ +   LL GH   G RG+      +    LLTLAY G +FV +++L
Sbjct: 217 LAFALIGALLIGHRVCGVRGRVAARVVLLSYLLLTLAYPGVKFVTQVLL 265