Pairwise Alignments

Query, 264 a.a., inner membrane protein YpjD from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., inner membrane protein YpjD from Dickeya dianthicola ME23

 Score =  253 bits (647), Expect = 2e-72
 Identities = 130/262 (49%), Positives = 179/262 (68%), Gaps = 3/262 (1%)

Query: 3   NLIAIAAAMLYLLSIATIVPGLVNQTGIRAKTVFISAAIALLFHGWLLSDLILHSS-GQN 61
           ++ AI A   Y LS+  I+P LV + G   +   +SA IAL+ H   L   I     GQN
Sbjct: 2   SVFAIVALAAYFLSLGLIIPSLVRKNGAYRRLAVVSATIALVCHAVALYQRIFDVQIGQN 61

Query: 62  LSILNVASLISFIISLAMSLAMFKTRLWFLLPVAYSFSAINLSAATFLPGTFITHLESDP 121
           LS+LN+ SLIS II   M++   + R WFLLP+ Y+F+ INL+ A+F+PG FITHLE+ P
Sbjct: 62  LSLLNIGSLISLIICTVMTIVASRNRGWFLLPIIYAFAFINLAFASFMPGEFITHLEAMP 121

Query: 122 KLLLHISLALFSYSTLSIGALYALQLAWLDHKLKSKKVFSINPNLPPLLLVERQLFKIIL 181
            L++HI LALF+Y+TL I ALYALQLA LD+ LK+KK+     ++PPLL +ER++F I  
Sbjct: 122 GLMVHIGLALFAYATLMIAALYALQLALLDYMLKTKKL-GFAADMPPLLGIERKMFHITQ 180

Query: 182 IGNLLLTGTLLTGFIFVQDMFA-QGKAHKGILSFVAWIVYSILLWGHYRKGWRGKKVTWF 240
           IG +LLT TL TG I++ D+ + +   HK + S +AW VY +LLWGHY +GWRG++V WF
Sbjct: 181 IGVILLTLTLCTGLIYMNDLLSNKENLHKALFSLLAWFVYILLLWGHYHEGWRGRRVVWF 240

Query: 241 AVAGATLLTLAYFGSRFVREII 262
            + GA LLTL+YFGSR ++  +
Sbjct: 241 NLIGALLLTLSYFGSRVIQNFL 262