Pairwise Alignments

Query, 264 a.a., inner membrane protein YpjD from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., Inner membrane protein YpjD from Acinetobacter radioresistens SK82

 Score =  116 bits (291), Expect = 4e-31
 Identities = 80/263 (30%), Positives = 136/263 (51%), Gaps = 5/263 (1%)

Query: 4   LIAIAAAMLYLLSIATIVPGLVNQTGIRAKTVFISAAIALLFHGWLLSDLILHSSGQNLS 63
           +  I A + Y  S   +   L+++       + +   + L  H  +L   +L  +G N  
Sbjct: 7   VFTILALIAYTTSFWYLFVNLMSKHQPNHGLIGVMLGLGLFLHAAVLYSDMLTPAGINYD 66

Query: 64  ILNVASLIS-FIISLAMSLAMFKTRLWF-LLPVAYSFSAINLSAATFLPGTFITHLESDP 121
           + N+ S  S  ++ L++  + ++  L   LL +  + + + +  A   P   I   + D 
Sbjct: 67  VFNLMSFTSGLMLLLSLLFSTYRPVLALNLLGIPVAATGLVMGFAFSRPTQIIE--QRDL 124

Query: 122 KLLLHISLALFSYSTLSIGALYALQLAWLDHKLKSKKVFSINPNL-PPLLLVERQLFKII 180
            L LHI L+L +Y+ L +  ++A+ L + + +LK+K+   I  NL P +  +E  LF +I
Sbjct: 125 GLDLHIILSLSAYAVLLMATIHAVLLWFQNRELKNKQKRRIWVNLLPSVQAMESLLFDLI 184

Query: 181 LIGNLLLTGTLLTGFIFVQDMFAQGKAHKGILSFVAWIVYSILLWGHYRKGWRGKKVTWF 240
           + G +LLT  L  GF  V + FAQ  AHK   S ++W +Y  LL GHY+ GWRG+K   F
Sbjct: 185 ITGFILLTIALGLGFFTVDNFFAQHLAHKTAFSIISWFIYGALLLGHYKFGWRGQKAIRF 244

Query: 241 AVAGATLLTLAYFGSRFVREIIL 263
            + G  LL + + GS+F+ E+IL
Sbjct: 245 TLVGFLLLAIGFIGSKFILEMIL 267