Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 874 a.a., Alanyl-tRNA synthetase (EC 6.1.1.7) from Variovorax sp. SCN45

 Score =  959 bits (2478), Expect = 0.0
 Identities = 490/868 (56%), Positives = 611/868 (70%), Gaps = 19/868 (2%)

Query: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRATTAQ 66
           ++R+ FL FF SKGH +V SSSLVP NDPTL+FTN+GM QFKD FLG +KR Y RA + Q
Sbjct: 10  DIRKTFLDFFASKGHTVVPSSSLVPGNDPTLMFTNSGMVQFKDVFLGEDKRPYVRAASVQ 69

Query: 67  RCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPKERL 126
            C+RAGGKHNDLENVG+TARHHTFFEMLGN+SFGDYFK +++++A+E LT V +LP E+L
Sbjct: 70  ACLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLKWAFELLTQVYKLPAEKL 129

Query: 127 LVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTEIFY 186
             TVY  DDEA+DIW K++G+P +R++RIGD KGG+ + SDNFW M DTGPCGPC+EIF+
Sbjct: 130 WATVYIEDDEAYDIWTKEIGLPPERVVRIGDNKGGR-YMSDNFWMMADTGPCGPCSEIFF 188

Query: 187 DHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERISAI 246
           DHG  I GGPPGSP+EDGDR+IEIWNNVFMQF+   DG+++ LP P VDTGMG+ER++AI
Sbjct: 189 DHGPEIPGGPPGSPDEDGDRYIEIWNNVFMQFDMQPDGSVKKLPAPCVDTGMGLERLAAI 248

Query: 247 MQGVHSNYEIDVFQTLIKAAADAIGYQDLTNQSLRVVADHIRSCAFLIVDGVMPSNEGRG 306
           +Q VHSNYEID+F  LIKAA    G QDL+N SL+V+ADHIR+ +FL+ DGV+PSNEGRG
Sbjct: 249 LQHVHSNYEIDIFDALIKAAGRETGTQDLSNNSLKVIADHIRATSFLVADGVIPSNEGRG 308

Query: 307 YVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLRIEEENF 366
           YV RRIIRRA+RHG KLG +  FFHKLV  L ++MG A  +L   +  +   L+ EEE F
Sbjct: 309 YVQRRIIRRAIRHGYKLGQKKPFFHKLVPDLVKLMGDAYPKLVADEKRITDTLKAEEERF 368

Query: 367 GRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERGFSIDEAGFEQ 426
             TL  GM IL+ AL     + L GE  FKL+DTYGFP DL+ DV RERG S+DEAGF  
Sbjct: 369 FETLANGMEILDAALVG-GARTLPGEVAFKLHDTYGFPLDLSADVCRERGVSVDEAGFNV 427

Query: 427 AMEEQRQRAREAGQFGTDYNSLIKSATNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGD 486
           AME+Q+   R  G+F  D N     A N  F GY      + V  +++EG  V  L  G 
Sbjct: 428 AMEKQKAAGRAGGKFKMDRNVEYTGAGNV-FTGYEHLEESAKVVALYLEGTAVQELKEGQ 486

Query: 487 KAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKL-GNAIAHHGVIAQGVLATGD 545
             I+VLD TPFYAESGGQ GD GVL  +   F VEDTQK+  +   HHG   QG L  GD
Sbjct: 487 SGIVVLDTTPFYAESGGQVGDQGVLVAEGVQFGVEDTQKIKADVFGHHGTQTQGTLKVGD 546

Query: 546 QVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTA 605
            V A VD  RRAA   NHS THL+H ALR+VLG+HV QKGSLV A+  RFDF+H   +T 
Sbjct: 547 AVKAAVDTARRAATMRNHSVTHLMHKALREVLGDHVQQKGSLVDADKTRFDFAHNAPVTR 606

Query: 606 AEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQVRVLSMGDFSTELC 665
            +I E+E+ VN E+  N   +  +M+++ A+  GAM LFGEKY + VRVL +G  S ELC
Sbjct: 607 EQIAEIEKRVNAEILANAPTQARVMDMESAQKTGAMMLFGEKYGETVRVLDIGS-SRELC 665

Query: 666 GGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLD--------------AQQA 711
           GG H S TGDIGLFKI+SEGG+AAG+RRIEAVTG  AL YL               +  A
Sbjct: 666 GGTHVSRTGDIGLFKIVSEGGVAAGVRRIEAVTGANALSYLQDLESTVQSVAATLKSPAA 725

Query: 712 QHDAKVSEMAAKAKLLEKEIQQLKDKLAAKESAGLINQVKQIAGVNVLVAQLNGADNKAL 771
           +   +++++  + K LE+E+  LK KLA+ +   L+ Q   + G+ VL A+L+GAD K L
Sbjct: 726 ELQGRLTQVLEQVKALEREVGSLKGKLASSKGDELLAQAVDVNGIKVLAAKLDGADAKTL 785

Query: 772 RGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVTNDLTNKVKAGELVNMVALQVGGKGGGR 831
           R  +D LK++L +  I+L  V   KV + AGVT D T KVKAGELVN VA QVGGKGGG+
Sbjct: 786 RDTMDKLKDKLKTAAIVLAAVDGDKVQIAAGVTADSTAKVKAGELVNFVAQQVGGKGGGK 845

Query: 832 PDMAQAGGTDAHALPSALESVDAWIAER 859
            DMA AGGT+   L +AL+SV AW+AER
Sbjct: 846 ADMAMAGGTNPAGLAAALQSVQAWVAER 873