Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 872 a.a., Alanine--tRNA ligase from Pseudomonas lactucae CFBP13502

 Score = 1080 bits (2794), Expect = 0.0
 Identities = 541/862 (62%), Positives = 653/862 (75%), Gaps = 16/862 (1%)

Query: 3   MSTDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRA 62
           M + E+R AFL FFE +GH  V SSSL+P NDPTLLFTNAGMNQFKDCFLG EKRAYTRA
Sbjct: 1   MKSAEIREAFLRFFEEQGHTRVSSSSLIPGNDPTLLFTNAGMNQFKDCFLGQEKRAYTRA 60

Query: 63  TTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLP 122
           T++Q+CVRAGGK++DLENVG+TARHHTFFEMLGNFSFGDYFK+DAI +AW FLT VL+LP
Sbjct: 61  TSSQKCVRAGGKNSDLENVGYTARHHTFFEMLGNFSFGDYFKKDAITFAWTFLTGVLKLP 120

Query: 123 KERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCT 182
           KE+L VTVY TDDEA+DIW +++G+P +R+IRIGD KG   + SDNFW MGDTGPCGPCT
Sbjct: 121 KEKLWVTVYATDDEAYDIWTQQIGVPVERMIRIGDNKGAP-YASDNFWTMGDTGPCGPCT 179

Query: 183 EIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242
           EIFYDHG +IWGGPPGSPEEDGDR+IEIWNNVFMQFNR ADG + PLP PSVDTGMG+ER
Sbjct: 180 EIFYDHGANIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLER 239

Query: 243 ISAIMQGVHSNYEIDVFQTLIKAAADAIGYQDLTNQSLRVVADHIRSCAFLIVDGVMPSN 302
           ISA+MQ VHSNYEID+F  L+ A+A AIG  + +  SL+VV+DHIRSC FLI DGV+PSN
Sbjct: 240 ISAVMQHVHSNYEIDLFTNLLSASAAAIGCANESQSSLKVVSDHIRSCGFLIADGVLPSN 299

Query: 303 EGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLRIE 362
           EGRGYVLRRIIRRA RHGNKLGA G+FF+K+V  L   MG A  ELK+QQ  +E+VL+ E
Sbjct: 300 EGRGYVLRRIIRRACRHGNKLGATGSFFYKIVAALVAEMGDAFPELKQQQGNIERVLKAE 359

Query: 363 EENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERGFSIDEA 422
           EE F +TL+ G+ IL   L +L G V+ G+ VFKLYDTYGFP DLT D+ARER  +IDEA
Sbjct: 360 EEQFSKTLEHGLKILEQDLAELKGTVVPGDVVFKLYDTYGFPMDLTADIARERELTIDEA 419

Query: 423 GFEQAMEEQRQRAREAGQFGTDYNSLIKSATNTEFCGYTASRGQSVVREMFVEGAEVSTL 482
           GFE+ ME QR RAR A  FG DYN+L+K    TEF GY A+ G + +  ++ +G  V  L
Sbjct: 420 GFEREMEAQRVRARSASSFGLDYNTLVKVDVATEFTGYKATVGSAKIVALYKDGKSVDVL 479

Query: 483 SAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKLGNAIAHHGVIAQGVLA 542
           + GD+A++VL+ TPFYAESGGQ GD G L + +G F V DT K G A  HHGV+  G L 
Sbjct: 480 NEGDEAVVVLNQTPFYAESGGQVGDCGFLSSTSGRFEVRDTTKTGGAFLHHGVLVLGNLT 539

Query: 543 TGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEA 602
            G  VD  VD   R A +LNHSATHLLHAALR+VLG+HV QKGSLV ++ LRFDFSH EA
Sbjct: 540 IGAPVDTQVDADVRHATALNHSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEA 599

Query: 603 MTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQVRVLSM-GDFS 661
           +  A+IK +E +VN E+R+N +++T   +I+ AKAKGAMALFGEKY D VRVLSM GDFS
Sbjct: 600 IPPAQIKALEDIVNAEIRKNTAVQTEETDIETAKAKGAMALFGEKYGDSVRVLSMGGDFS 659

Query: 662 TELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDA------ 715
            ELCGGIHA+ TGDI L KIISE G+A+G+RRIEAVTG  AL YL+A + Q         
Sbjct: 660 VELCGGIHANRTGDIALLKIISESGVASGVRRIEAVTGAAALAYLNAAEEQLKEAASLVK 719

Query: 716 --------KVSEMAAKAKLLEKEIQQLKDKLAAKESAGLINQVKQIAGVNVLVAQLNGAD 767
                   K+S +  + + LEK+++QL+ K A+     L      +  V VL A+L+G D
Sbjct: 720 GSRDNLIDKLSAVLERNRALEKQLEQLQAKAASAAGDDLSASAVDVKDVKVLAARLDGQD 779

Query: 768 NKALRGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVTNDLTNKVKAGELVNMVALQVGGK 827
            KAL  +VD LKN+L   +I+LG+V E KV L+AGVT DLT ++KAG+L+   A  VGGK
Sbjct: 780 GKALLALVDQLKNKLGRAVILLGSVHEDKVVLVAGVTKDLTGQLKAGDLMKQAAAAVGGK 839

Query: 828 GGGRPDMAQAGGTDAHALPSAL 849
           GGGRPDMAQ GG DA AL +AL
Sbjct: 840 GGGRPDMAQGGGVDAGALDAAL 861