Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 878 a.a., alanine--tRNA ligase from Magnetospirillum magneticum AMB-1

 Score =  847 bits (2189), Expect = 0.0
 Identities = 446/881 (50%), Positives = 581/881 (65%), Gaps = 41/881 (4%)

Query: 4   STDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRAT 63
           + +E+RR FL FFE  GH +V SS LVP NDPTL+FTNAGM QFK+ F G+EKR Y RA 
Sbjct: 3   TANEIRRTFLDFFEKNGHTVVNSSPLVPRNDPTLMFTNAGMVQFKNVFTGIEKRDYVRAA 62

Query: 64  TAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPK 123
           ++Q+CVRAGGKHNDL+NVG+TARHHTFFEMLGNFSFGDYFK+ AI++AW  +T    + K
Sbjct: 63  SSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDLAIEHAWNLITKDFGIDK 122

Query: 124 ERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTE 183
            RLLVTVY  DD+A D W K  G+P  RIIRI          SDNFW MGDTGPCGPC+E
Sbjct: 123 SRLLVTVYHDDDQAADAWKKIAGLPESRIIRIP--------TSDNFWAMGDTGPCGPCSE 174

Query: 184 IFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERI 243
           IFYDHG+HI+GGPPGSP++DGDRFIEIWN VFMQF +    T  PLPKPS+DTGMG+ER+
Sbjct: 175 IFYDHGEHIFGGPPGSPDQDGDRFIEIWNLVFMQFEQVDKETRIPLPKPSIDTGMGLERL 234

Query: 244 SAIMQGVHSNYEIDVFQTLIKAAADAIGY--QDLTNQSLRVVADHIRSCAFLIVDGVMPS 301
           +A++QG H NY++D+ + LI+A+A+A           S RVVADH+RS +FLI DGV+PS
Sbjct: 235 AALLQGKHDNYDVDLLRALIEASAEASNTDPDGPHKVSHRVVADHLRSSSFLIADGVLPS 294

Query: 302 NEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLRI 361
           NEGRGYVLRRI+RRA+RH + +G      HKLV  L   MG A  EL +  AL+ + L++
Sbjct: 295 NEGRGYVLRRIMRRAMRHAHLMGCTEPLLHKLVPALTRQMGEAYPELVRANALITETLKL 354

Query: 362 EEENFGRTLDRGMSILNDALDQL-SGQVLDGETVFKLYDTYGFPADLTNDVARERGFSID 420
           EE  F  TLD+G+ +L+D + ++ SGQ L GE  FKLYDTYGFP DLT D  + +G  +D
Sbjct: 355 EETRFKVTLDKGLKLLDDEITRIGSGQKLAGEVAFKLYDTYGFPLDLTQDALKAKGIGVD 414

Query: 421 EAGFEQAMEEQRQRAREA----GQFGTD--YNSLIKSATNTEFCGYTASRGQSVVREMFV 474
             GF  AME QR  AR+A    G   T+  +  L +    +EF GY A + +  +  +  
Sbjct: 415 TDGFASAMERQRAEARKAWAGSGDTATETVWFELREKLGASEFLGYDAEQAEGKIVALVE 474

Query: 475 EGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDA------GIFHVEDTQ-KLG 527
            G  V  +  G +  ++ + TPFY ESGGQ GDTGV+              V DTQ KLG
Sbjct: 475 NGKVVEAVHPGHQVAVIANQTPFYGESGGQMGDTGVITLGTPGTGGKATIAVTDTQKKLG 534

Query: 528 NAIAHHGVIAQGVLATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSL 587
           + I H G +  G +A G+     V+  RR A   +HSATHLLHAALR +LG+HV QKGS 
Sbjct: 535 DLIVHFGTVEGGPVAVGEDAHFAVESTRRDATRGHHSATHLLHAALRDILGDHVTQKGSQ 594

Query: 588 VRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEK 647
           V  + LRFDF+H +A++A E + VE  VN+ +R N  + T +M  D+A   GAMALFGEK
Sbjct: 595 VGPDRLRFDFAHTKALSAEETRAVEAEVNRRIRLNAEVATKVMTPDDAIKAGAMALFGEK 654

Query: 648 YDDQVRVLSMGDFSTELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEG------ 701
           Y ++VRV+SMGD STELCGG HA+ TGDIG FKI++E  +A+G+RRIEAVTG        
Sbjct: 655 YGEEVRVVSMGDLSTELCGGTHANRTGDIGGFKIVAESAVASGVRRIEAVTGPAFLAWAQ 714

Query: 702 --------ALDYLDAQQAQHDAKVSEMAAKAKLLEKEIQQLKDKLAAKESAGLINQVKQI 753
                   A D L A  A   A+++ +    + LE+E+ +++ +LA     G     K +
Sbjct: 715 AQEDLLAKAADTLKAAPADLPARIAGLMDDRRKLERELAEVRKQLATGGGQGA--ATKTV 772

Query: 754 AGVNVLVAQLNGADNKALRGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVTNDLTNKVKA 813
            G+      L+G   K L+GM D++K Q+ SGII L + A+GK  ++  VT DLT+K  A
Sbjct: 773 NGITYAGKVLSGVPAKDLKGMADEIKKQIGSGIIALVSDADGKASIVVCVTEDLTSKHSA 832

Query: 814 GELVNMVALQVGGK-GGGRPDMAQAGGTDAHALPSALESVD 853
            +LV + +  +GGK GGGRPDMAQAGG DA A  +A++ ++
Sbjct: 833 VDLVRIGSEALGGKGGGGRPDMAQAGGPDASAAQAAVDRIE 873