Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 876 a.a., alanyl-tRNA synthetase (NCBI) from Escherichia coli BW25113

 Score = 1186 bits (3069), Expect = 0.0
 Identities = 600/876 (68%), Positives = 701/876 (80%), Gaps = 17/876 (1%)

Query: 1   MFMSTDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYT 60
           M  ST E+R+AFL FF SKGHQ+V SSSLVP NDPTLLFTNAGMNQFKD FLGL+KR Y+
Sbjct: 1   MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYS 60

Query: 61  RATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDV-- 118
           RATT+QRCVRAGGKHNDLENVG+TARHHTFFEMLGNFSFGDYFK DAIQ+AWE LT    
Sbjct: 61  RATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKW 120

Query: 119 LQLPKERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPC 178
             LPKERL VTVYE+DDEA++IW K+VGIP +RIIRIGD KG   + SDNFWQMGDTGPC
Sbjct: 121 FALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAP-YASDNFWQMGDTGPC 179

Query: 179 GPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGM 238
           GPCTEIFYDHGDHIWGGPPGSPEEDGDR+IEIWN VFMQFNR ADGTMEPLPKPSVDTGM
Sbjct: 180 GPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGM 239

Query: 239 GIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQDLTNQSLRVVADHIRSCAFLIVDGV 298
           G+ERI+A++Q V+SNY+ID+F+TLI+A A   G  DL+N+SLRV+ADHIRSCAFLI DGV
Sbjct: 240 GLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADGV 299

Query: 299 MPSNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKV 358
           MPSNE RGYVLRRIIRRAVRHGN LGA+  FF+KLVGPL +VMG+AG +LK+QQA VE+V
Sbjct: 300 MPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQV 359

Query: 359 LRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERGFS 418
           L+ EEE F RTL+RG+++L++ L +LSG  LDGET F+LYDTYGFP DLT DV RER   
Sbjct: 360 LKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIK 419

Query: 419 IDEAGFEQAMEEQRQRAREAGQFGTDYNSLIKSATNTEFCGYTASRGQSVVREMFVEGAE 478
           +DEAGFE AMEEQR+RAREA  FG DYN++I+  + +EF GY        V  +FV+G  
Sbjct: 420 VDEAGFEAAMEEQRRRAREASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKA 479

Query: 479 VSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKLGNAIAHHGVIAQ 538
           V  ++AG +A++VLD TPFYAESGGQ GD G LK     F VEDTQK G AI H G +A 
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLAA 539

Query: 539 GVLATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFS 598
           G L  GD V A VDE RRA I LNHSATHL+HAALR+VLG HV+QKGSLV  + LRFDFS
Sbjct: 540 GSLKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFS 599

Query: 599 HLEAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQVRVLSMG 658
           H EAM   EI+ VE LVN ++RRN  IETNIM+++ AKAKGAMALFGEKYD++VRVLSMG
Sbjct: 600 HNEAMKPEEIRAVEDLVNTQIRRNLPIETNIMDLEAAKAKGAMALFGEKYDERVRVLSMG 659

Query: 659 DFSTELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALD--YLDAQQAQHDA- 715
           DFSTELCGG HAS TGDIGLF+IISE G AAG+RRIEAVTGEGA+   + D+ +    A 
Sbjct: 660 DFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAH 719

Query: 716 -----------KVSEMAAKAKLLEKEIQQLKDKLAAKESAGLINQVKQIAGVNVLVAQLN 764
                      KV  +  + + LEKE+QQLK++ AA+ESA L ++   + GV +LV++L+
Sbjct: 720 LLKGDSNNLADKVRSVLERTRQLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELS 779

Query: 765 GADNKALRGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVTNDLTNKVKAGELVNMVALQV 824
           G + K LR MVDDLKNQL S II+L  V EGKV LIAGV+ D+T++VKAGEL+ MVA QV
Sbjct: 780 GVEPKMLRTMVDDLKNQLGSTIIVLATVVEGKVSLIAGVSKDVTDRVKAGELIGMVAQQV 839

Query: 825 GGKGGGRPDMAQAGGTDAHALPSALESVDAWIAERL 860
           GGKGGGRPDMAQAGGTDA ALP+AL SV  W++ +L
Sbjct: 840 GGKGGGRPDMAQAGGTDAAALPAALASVKGWVSAKL 875