Pairwise Alignments

Query, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 887 a.a., alanyl-tRNA synthetase from Agrobacterium fabrum C58

 Score =  875 bits (2261), Expect = 0.0
 Identities = 462/895 (51%), Positives = 597/895 (66%), Gaps = 56/895 (6%)

Query: 6   DEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRATTA 65
           +E+R  FL +F+  GH+IV SS LVP NDPTL+FTNAGM QFK+ F GLE R Y+ A +A
Sbjct: 5   NEIRSTFLDYFKKNGHEIVPSSPLVPRNDPTLMFTNAGMVQFKNVFTGLESRPYSTAASA 64

Query: 66  QRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLPKER 125
           Q+CVRAGGKHNDL+NVG+TARHHTFFEMLGNFSFGDYFKE+AI +AW  +T    + + R
Sbjct: 65  QKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEEAITHAWNLITKEFGIDRNR 124

Query: 126 LLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCTEIF 185
           LLVTVY TDDEAF++W K  G   DRIIRI          SDNFW MGDTGPCGPC+EIF
Sbjct: 125 LLVTVYHTDDEAFNLWKKIAGFSDDRIIRIP--------TSDNFWAMGDTGPCGPCSEIF 176

Query: 186 YDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERISA 245
           YDHGDHIWGGPPGSPEEDGDRFIEIWN VFMQ+ +        LP+PS+DTGMG+ERISA
Sbjct: 177 YDHGDHIWGGPPGSPEEDGDRFIEIWNLVFMQYEQLTKEERIDLPRPSIDTGMGLERISA 236

Query: 246 IMQGVHSNYEIDVFQTLIKAAADAIGY--QDLTNQSLRVVADHIRSCAFLIVDGVMPSNE 303
           ++QG H NY+ D+F+ LI A+ +A G   +     S RV+ADH+RS AFLI DGV+PS+E
Sbjct: 237 LLQGKHDNYDTDLFRALIAASVEATGVPAEGEHRASHRVIADHLRSSAFLIADGVLPSSE 296

Query: 304 GRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLRIEE 363
           GRGYVLRRI+RRA+RH   LG++    ++L+  L + MG A  EL + +AL+ + L++EE
Sbjct: 297 GRGYVLRRIMRRAMRHAELLGSRDPLIYRLLPALIQQMGRAYPELVRAEALISETLKLEE 356

Query: 364 ENFGRTLDRGMSILNDALDQL-SGQVLDGETVFKLYDTYGFPADLTNDVARERGFSIDEA 422
             F +TL+RG+S+L+DA   L  G +LDGET FKLYDTYGFP DLT D  R R   +D +
Sbjct: 357 TRFRKTLERGLSLLSDATSTLHKGDMLDGETAFKLYDTYGFPLDLTQDALRAREIGVDIS 416

Query: 423 GFEQAMEEQRQRARE----AGQFGTD--YNSLIKSATNTEFCGYTASRGQSVVREMFVEG 476
           GF  AM+ Q+  AR     +G   T+  +  L +    TEF GY     + V++ +  +G
Sbjct: 417 GFTDAMQRQKAEARSHWAGSGDKATETVWFELKEKFGATEFLGYDTESAEGVIQAIVRDG 476

Query: 477 AEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKLGNAI-AHHGV 535
            EV + + G+   IV++ TPFY ESGGQ GDTGV+  DAG F V  TQK G  +  H G 
Sbjct: 477 KEVDSAAEGETVHIVVNQTPFYGESGGQMGDTGVIVGDAGTFDVSGTQKKGEGLFVHSGT 536

Query: 536 IAQGVLATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRF 595
           +++G L   + V   VD  RR+ +  NHSATHLLH ALR+VLG HVAQKGSLV  E LRF
Sbjct: 537 VSKGGLKVNEAVQLTVDHDRRSRLRANHSATHLLHEALREVLGTHVAQKGSLVAPERLRF 596

Query: 596 DFSHLEAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQVRVL 655
           D SH + M+A E+K VE + N+ V +N  + T +M++D+A A+GAMALFGEKY D+VRV+
Sbjct: 597 DVSHPKPMSAEELKVVEDMANEIVLQNSPVVTRLMSVDDAIAEGAMALFGEKYGDEVRVV 656

Query: 656 SMG----------DFSTELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDY 705
           SMG           +S ELCGG H + TG IGL +I+ E  + +G+RR+EAVTG+GAL Y
Sbjct: 657 SMGTGLHGAKANRPYSVELCGGTHVAATGQIGLIRILGESAVGSGVRRLEAVTGQGALAY 716

Query: 706 LDAQQAQHDAKVSEMAAKAKL------------------LEKEIQQLKDKLA---AKESA 744
           L    A+ D +V  +A+  K+                  LE+E+   + KLA       A
Sbjct: 717 L----AEQDERVKALASSLKVQPGDVLSRVEGLLDERKKLERELADARKKLAMGGGSSDA 772

Query: 745 GLINQVKQIAGVNVLVAQLNGADNKALRGMVDDLKNQLSSGIIMLGNVA-EGKVGLIAGV 803
           G  N V+Q+AGVN L   L+G D K L+G+ D+ K  L SG+++L  V+ +GK   +A V
Sbjct: 773 G-ANDVQQVAGVNFLAKSLSGIDAKDLKGLADEAKANLGSGVVLLIAVSDDGKASAVAAV 831

Query: 804 TNDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAGGTDAHALPSALESVDAWIA 857
           T DLT +  A ++V   +  +GGK GGGRPDMAQAGG D      A+E+V A +A
Sbjct: 832 TEDLTGRFSAVDIVRTASAALGGKGGGGRPDMAQAGGPDGTKAKEAIEAVAAALA 886