Pairwise Alignments

Query, 354 a.a., DNA recombination/repair protein RecA from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., Protein RecA from Xanthobacter sp. DMC5

 Score =  456 bits (1172), Expect = e-133
 Identities = 229/344 (66%), Positives = 282/344 (81%), Gaps = 7/344 (2%)

Query: 4   NKQKALAAALGQIEKQFGKGSIMRLGDN-RAMDVETISTGSLSLDIALGAGGLPMGRIVE 62
           +K KAL AAL QIE+ FGKGSIMRLG   +A+++E+I TGSL LDIALG GGLP GR+VE
Sbjct: 15  DKTKALDAALSQIERHFGKGSIMRLGKGGKALEIESIPTGSLGLDIALGIGGLPKGRVVE 74

Query: 63  IFGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDTGE 122
           I+GPESSGKTTL L  IA +Q+ G TCAFIDAEHALDP+YA+KLGVN+D+LL+SQPD GE
Sbjct: 75  IYGPESSGKTTLALHTIAESQKRGGTCAFIDAEHALDPIYARKLGVNLDDLLISQPDAGE 134

Query: 123 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLK 182
           QALEI D L RSGAVDV+VVDSVAALTP+AE++GEMGD+  GLQAR++SQA+RKLT ++ 
Sbjct: 135 QALEIADTLVRSGAVDVLVVDSVAALTPRAELDGEMGDNQPGLQARLMSQALRKLTASIS 194

Query: 183 QSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNETR 242
           +SN M IFINQIRMKIGVM+G+PETTTGGNALKFYAS+RLDIRR GAIKE +EVVGN+TR
Sbjct: 195 KSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASIRLDIRRIGAIKERDEVVGNQTR 254

Query: 243 IKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQGKA 302
           +KVVKNK+A PFK+    IMYG+G ++ GEL+DLGVK  +VEKSGAW+S++  ++GQG+ 
Sbjct: 255 VKVVKNKLAPPFKQVEFDIMYGEGVSKTGELLDLGVKAGVVEKSGAWFSHDSQRLGQGRE 314

Query: 303 NACKYLKENPEIAKTLDKKLREMLLNPENMQLIAETSSAADDVE 346
           NA  +LK+N E+A  ++  +R      +N  LIAE   A D  E
Sbjct: 315 NAKTFLKQNQEVAARIEAAIR------QNAGLIAEKILAGDPEE 352