Pairwise Alignments

Query, 354 a.a., DNA recombination/repair protein RecA from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., RecA protein from Sphingobium sp. HT1-2

 Score =  463 bits (1191), Expect = e-135
 Identities = 223/320 (69%), Positives = 275/320 (85%)

Query: 4   NKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEI 63
           ++QKAL AAL QI++ FGKGS M+LG    +++E+ISTGSL LDIALG GGLP GRI+EI
Sbjct: 17  DRQKALEAALAQIDRAFGKGSAMKLGSREKIEIESISTGSLGLDIALGIGGLPKGRIIEI 76

Query: 64  FGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDTGEQ 123
           +GPESSGKTTLTL  IA AQ+ G T AF+DAEHALDP+YAKKLGV+IDEL+VSQPDTGEQ
Sbjct: 77  YGPESSGKTTLTLHAIAEAQKAGGTAAFVDAEHALDPIYAKKLGVDIDELIVSQPDTGEQ 136

Query: 124 ALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQ 183
           ALEI D L RS A+D++VVDSVAAL P+AEIEGEMGDSH+GLQAR++SQA+RKLTG++ +
Sbjct: 137 ALEIVDTLVRSNAIDILVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGSIAR 196

Query: 184 SNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNETRI 243
           S CM IFINQ+RMKIGVM+GNPETTTGGNALKFYASVRLDIRRTG IK+ +++VGN TR+
Sbjct: 197 SKCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDRDDIVGNATRV 256

Query: 244 KVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQGKAN 303
           KVVKNK+A PFK+    IMYG+G ++ GE++D+GVK  +VEKSG+W+SY+  +IGQG+ N
Sbjct: 257 KVVKNKVAPPFKQVEFDIMYGEGISKIGEMLDIGVKAGLVEKSGSWFSYDSVRIGQGREN 316

Query: 304 ACKYLKENPEIAKTLDKKLR 323
           A  +LKENPE+A  L+K +R
Sbjct: 317 AKTFLKENPEMADRLEKAIR 336