Pairwise Alignments

Query, 354 a.a., DNA recombination/repair protein RecA from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., RecA protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  560 bits (1442), Expect = e-164
 Identities = 284/346 (82%), Positives = 316/346 (91%), Gaps = 4/346 (1%)

Query: 1   MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRI 60
           +DENKQKALAAALGQIEKQFGKGSIMRLG++R+MDVETISTGSLSLDIALGAGGLPMGRI
Sbjct: 3   IDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62

Query: 61  VEIFGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDT 120
           VEI+GPESSGKTTLTL++IAAAQREGKTCAFIDAEHALDPVYA+KLGV+ID LL SQPDT
Sbjct: 63  VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122

Query: 121 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGN 180
           GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGE+GDSHMGL ARM+SQAMRKL GN
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182

Query: 181 LKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNE 240
           LKQSN + IFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRR GA+KEG+ VVG+E
Sbjct: 183 LKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242

Query: 241 TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQG 300
           TR+KVVKNKIAAPFK+A  QI+YG+G N  GEL+DLGVK K++EK+GAWYSYNG+KIGQG
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302

Query: 301 KANACKYLKENPEIAKTLDKKLREMLLNPENMQLIAETSSAADDVE 346
           KANA  +LKENP  AK ++K++RE+LL+ +N    A    A DD E
Sbjct: 303 KANATTWLKENPATAKEIEKRVRELLLSNQN----ATPDFAVDDSE 344