Pairwise Alignments

Query, 354 a.a., DNA recombination/repair protein RecA from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., Recombinase A from Alteromonas macleodii MIT1002

 Score =  540 bits (1392), Expect = e-158
 Identities = 265/352 (75%), Positives = 310/352 (88%), Gaps = 4/352 (1%)

Query: 1   MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRI 60
           MD+NK KAL AA+GQIEKQFGKG+IMRLGDN+AMD+E ISTGSL++DIALG GGLP GR+
Sbjct: 1   MDDNKSKALTAAVGQIEKQFGKGAIMRLGDNQAMDIEAISTGSLTIDIALGIGGLPCGRV 60

Query: 61  VEIFGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDT 120
           VEI+GPESSGKTTLTL++IA AQR+GKTCAF+DAEHALDPVYA+KLGVNIDELLVSQPDT
Sbjct: 61  VEIYGPESSGKTTLTLQVIAEAQRKGKTCAFVDAEHALDPVYAEKLGVNIDELLVSQPDT 120

Query: 121 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGN 180
           GEQALEICD L RSGAVDV++VDSVAALTPKAEIEG+MGDSH+GLQAR++SQA+RKLT N
Sbjct: 121 GEQALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTAN 180

Query: 181 LKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNE 240
           +K+SN +CIFINQIRMKIGVMFGNPETTTGGNALKFY+SVRLDIRR GA+KEG+EVVGNE
Sbjct: 181 IKRSNTLCIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGAVKEGDEVVGNE 240

Query: 241 TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQG 300
           TR+KVVKNK+A PFK+A   I YG+G ++E ELIDLGVK K+V+K+GAWYSY GD+IGQG
Sbjct: 241 TRVKVVKNKVAPPFKQAEFMIRYGEGISKEAELIDLGVKQKLVDKAGAWYSYKGDRIGQG 300

Query: 301 KANACKYLKENPEIAKTLDKKLREMLLNPENMQLIAETSSAADDVEFGAVPE 352
           KAN  K+LKENPEIA  ++ K+R+ LL  + M    +   A    E G +PE
Sbjct: 301 KANVMKFLKENPEIANEIETKIRQELLLSKTM----KAEEAIPQQEDGVLPE 348