Pairwise Alignments

Query, 295 a.a., cysteine synthase CysM from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., cysteine synthase from Pseudomonas simiae WCS417

 Score =  200 bits (508), Expect = 4e-56
 Identities = 121/303 (39%), Positives = 175/303 (57%), Gaps = 18/303 (5%)

Query: 11  VGQTPLVRLQRLNAGRSTVLVKLEGNNPAGSVKDRPALNMIVQAEARGSLQPGDTIIEAT 70
           +G TPLV++ R+     T+L K+EG NP  SVK R   NMI  AE+ G L+PG TI+E T
Sbjct: 12  IGNTPLVQINRIAPRGVTILAKIEGRNPGYSVKCRIGANMIWDAESTGKLKPGMTIVEPT 71

Query: 71  SGNTGIALAMAAAIKGYKMILIMPDNATQERKDSMRAYGAELILVSKEQGMEGARDLALQ 130
           SGNTGI LA  AA +GYK++L MP + + ER+  ++A GAEL+L    +GM+GA + A +
Sbjct: 72  SGNTGIGLAFVAAARGYKLLLTMPASMSIERRKVLKALGAELVLTEPAKGMKGAIEKAGE 131

Query: 131 MQQEGKGKVL--DQFNNLDNPDAHYRSTGPEIWQQSQGKITHFVSSMGTTGTIMGVSRYL 188
           +            QF N  NP  H ++TGPEIW  + G +   V+ +GT GTI GVSRY+
Sbjct: 132 IVASDPATYFMPAQFENPANPAIHEKTTGPEIWNDTDGAVDVLVAGVGTGGTITGVSRYI 191

Query: 189 KQ-QNPQIQIIGLQP------SEGSAIPGIRRWPQ-------AYLPGIFDAARVDQVLDV 234
           K      I  + ++P      ++  A   I+  P         ++P   D + VD+V  V
Sbjct: 192 KNIAGKPILSVAVEPIVSPVITQALAGEEIKPSPHKIQGIGAGFVPKNLDLSMVDRVELV 251

Query: 235 TQTDAEQTARALAREEGICAGVSSGGAVFAALQIAQ--QNPGSVVVAIVCDRGDRYLSSG 292
           T  +++  A  L +EEGI  G+S G A+  A+++A+  +  G  +V I+ D G+RYLSS 
Sbjct: 252 TDDESKAMALRLMQEEGILCGISCGAAMAVAVRLAEKPEMQGKTIVVILPDSGERYLSSM 311

Query: 293 LFS 295
           LFS
Sbjct: 312 LFS 314