Pairwise Alignments

Query, 862 a.a., DNA mismatch repair protein MutS from Vibrio cholerae E7946 ATCC 55056

Subject, 892 a.a., DNA mismatch repair protein MutS from Paraburkholderia sabiae LMG 24235

 Score =  835 bits (2157), Expect = 0.0
 Identities = 467/886 (52%), Positives = 585/886 (66%), Gaps = 28/886 (3%)

Query: 2   MKSNASPSESLSHHTPMMQQYLRLKAENPDILLFYRMGDFYELFYDDAKRASELLDISLT 61
           M +  + +   + HTPMMQQYLR+K E+P  L+FYRMGDFYELF+DDA++A+ LLD++LT
Sbjct: 1   MGTQTAAASDNTQHTPMMQQYLRIKGEHPGTLVFYRMGDFYELFFDDAEKAARLLDLTLT 60

Query: 62  KRGASAGEPIPMAGVPFHAVEGYLAKLVQMGESVAICEQIGDPATSKGPVERKVVRIVTP 121
           +RGAS G PI MAGVP HAVE YLAKLV++GESVAICEQIGDPATSKGPVERKVVR+VTP
Sbjct: 61  RRGASGGNPIKMAGVPHHAVEQYLAKLVKLGESVAICEQIGDPATSKGPVERKVVRVVTP 120

Query: 122 GTVTDEALLSERVDN-LIAAIYHHNGR-----FGYATMDITSGRFQLSEPQTEEEMAAEL 175
           GT+TD ALLS++ D  L+A    HN R      G A +++ SG  +L+E    +++AA L
Sbjct: 121 GTLTDAALLSDKSDTYLLAVCAGHNRRGLVTTVGLAWLNLASGALRLAEV-APDQVAAAL 179

Query: 176 QRTSPRELLFPE-----DFSPVHLMASRQGNRRRPIWEFELDTAKQQLNQQFGTRDLVGF 230
           +R  P E+L  +     D +   +        R P+W F++ +  Q+L  Q     L GF
Sbjct: 180 ERIRPAEILVADAPSSGDSNAWSVPTGFGATTRVPVWHFDIASGTQRLCDQLEVAGLDGF 239

Query: 231 GVEQAKLGLCAAGCLIQYVKDTQRTALPHIRSLTWDRQDQSVILDAATRRNLELTHNLAG 290
           G         AAG L+ Y   TQ   L H+RSL  + + + + LD +TRRNLELT  L G
Sbjct: 240 GAHSLSCACGAAGALLLYAAATQGQQLRHVRSLKVEYESEYIGLDPSTRRNLELTETLRG 299

Query: 291 GTDNTLAEVLDHCATPMGSRMLKRWIHQPMRDNATLNQRLDAITELKET---ALYGELHP 347
               TL  +LD C T MGSR+L+ W+H P RD A    R  AI  L +    A    L  
Sbjct: 300 TDSPTLCSLLDTCCTTMGSRLLRHWLHHPPRDAAFAQARQQAIGALLDAPPEASLDALRG 359

Query: 348 VLKQIGDIERILARLALRSARPRDLARLRHAMQQLPELHSVMSELKQP--HLTELRTHAE 405
            L+QI DIERI  RLAL SARPRDL+ LR     LPEL + ++ L      L  +    E
Sbjct: 360 ALRQISDIERITGRLALLSARPRDLSSLRDTFVALPELRAQLTALTAAADSLARIDASLE 419

Query: 406 PMDELCDLLERAIKENPPVVIRDGGVIADGYSAELDEWRDLANGATEFLERLEAEERDRH 465
           P  +  DLL+RA+ + P  +IRDGGVIA GY A+LDE RD++    +FL  LE  ER R 
Sbjct: 420 PPADCVDLLKRAVAQEPAAMIRDGGVIARGYDADLDELRDISENCGQFLIDLETRERART 479

Query: 466 GIDTLKVGYNNVHGFYIQVSRGQSHLVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKS 525
           GI  L+V YN VHGFYI+V+RGQ+  VP  Y RRQTLKNAERYI  ELK  EDK L+++ 
Sbjct: 480 GIGNLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQE 539

Query: 526 RALALEKQLWEELFDLLMPHLEQLQQLAASVAQLDVLQNLAERAENLEYCRPTLVQEAGI 585
           RALA EK L++ L   L+P +   Q++A+++A+LD+L   AERA  L++  P+     GI
Sbjct: 540 RALAREKALYDALLQSLLPFIADCQRVASALAELDLLAAFAERARALDWVAPSFSPTGGI 599

Query: 586 HIQGGRHPVVERVMNEPFIANPIELNPQRRMLIITGPNMGGKSTYMRQTALIALMAHIGS 645
            I+ GRHPVVE  + E FIAN   LNP+R++L+ITGPNMGGKST+MRQTALIALMA++GS
Sbjct: 600 DIEQGRHPVVEAQV-EQFIANDCALNPERKLLLITGPNMGGKSTFMRQTALIALMAYVGS 658

Query: 646 YVPAESASIGPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATRNSLVLMDEIGRG 705
           YVPA  AS GP+DRIFTRIGA+DDLA GRSTFMVEMTE A IL++AT  SLVLMDEIGRG
Sbjct: 659 YVPARRASFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRG 718

Query: 706 TSTYDGLSLAWASAEWLAKEIGAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAF 765
           TST+DGL+LAWA A  L    G  TLFATHYFELT+LP   PH ANVHL AVEHG GI F
Sbjct: 719 TSTFDGLALAWAIARHLLAHNGCHTLFATHYFELTQLPAEFPHAANVHLSAVEHGHGIVF 778

Query: 766 MHAVQEGAASKSYGLAVAGLAGVPKPVIKNARAKLQQLELLS-SQPAETRKPSRVDIANQ 824
           +HAV EG A++SYGL VA LAGVP  VI+ AR  L  LE  S +QPA         +A  
Sbjct: 779 LHAVNEGPANQSYGLQVAQLAGVPNAVIRAARKHLAYLEQQSAAQPAPQLDLFAAPVAML 838

Query: 825 LSLIPEPS---------AVEQALAGVDPDQLTPRQALDMLYQLKKL 861
                EP+         A+ + L  +DP+ L PR ALD+L++L +L
Sbjct: 839 EDADDEPAAPALDPATLALVERLREIDPNDLRPRDALDLLFELHEL 884