Pairwise Alignments

Query, 862 a.a., DNA mismatch repair protein MutS from Vibrio cholerae E7946 ATCC 55056

Subject, 877 a.a., DNA mismatch repair protein MutS from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  597 bits (1540), Expect = e-175
 Identities = 343/861 (39%), Positives = 518/861 (60%), Gaps = 16/861 (1%)

Query: 16  TPMMQQYLRLKAENPDILLFYRMGDFYELFYDDAKRASELLDISLTKRGASAGEPIPMAG 75
           TP+M+QY  +KA++P  LL +R+GDFYE F +DA +AS++LDI LTKRG  +     +AG
Sbjct: 10  TPLMKQYNAIKAKHPGALLLFRVGDFYETFGEDAIKASKILDIVLTKRGNGSASETALAG 69

Query: 76  VPFHAVEGYLAKLVQMGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDEALLSERVD 135
            P H+++ YL KLV+ GE VAIC+Q+ DP T KG V+R V  +VTPG   ++ +L  R +
Sbjct: 70  FPHHSLDTYLPKLVRAGERVAICDQLEDPKTVKGIVKRGVTELVTPGVSFNDQVLERRSN 129

Query: 136 NLIAAIYHHNGRFGYATMDITSGRFQLSEPQTEEEMAAELQRTSPRELLFPEDFSPVHLM 195
           N +AA++      G + +D+++G F ++    +  +   LQ  +P E+LF +        
Sbjct: 130 NYLAAVHFGKTETGVSFLDVSTGEF-ITAQGDKSYIGKLLQSLAPAEVLFCKREKETFFE 188

Query: 196 ASRQGNRRRPI--WEFELDTAKQQLNQQFGTRDLVGFGVEQAKLGLCAAGCLIQYVKDTQ 253
                 R   +  W F  D A + L +QF T  L GFG+E  + G+ +AG ++ Y+ +TQ
Sbjct: 189 RYGPDFRYYALEEWVFNYDFAYESLTRQFSTASLKGFGIEGMREGIVSAGAILHYLSETQ 248

Query: 254 RTALPHIRSLTWDRQDQSVILDAATRRNLELTHNLAGGTDNTLAEVLDHCATPMGSRMLK 313
              + HI +++   +D+ V LD  T RNLEL +         L  VLD   TPMG+R+LK
Sbjct: 249 HNEISHIATISRLEEDKYVWLDRFTVRNLELVYP-QHPEGVPLINVLDQTVTPMGARLLK 307

Query: 314 RWIHQPMRDNATLNQRLDAITELKE-TALYGELHPVLKQIGDIERILARLALRSARPRDL 372
           +W+  P++D   + +RLD +  L +   L  EL   LKQI D+ER+++++A+R   PR+L
Sbjct: 308 KWVVLPLKDVTQIRRRLDTVEALTQHQELLEELVLHLKQINDLERLISKVAVRRVNPREL 367

Query: 373 ARLRHAMQQLPELHSVMSELKQPHLTELRTHAEPMDELCDLLERAIKENPPVVIRDGGVI 432
            +L  A++ +  +  V++    P L +L     P D L + +   +K  PP++   G +I
Sbjct: 368 VQLAKALEAILPIQKVLALSDIPALQKLAAQLAPCDGLREEIRNVLKPEPPMLTNQGNMI 427

Query: 433 ADGYSAELDEWRDLANGATEFLERLEAEERDRHGIDTLKVGYNNVHGFYIQVSRGQSHLV 492
            +G + ELDE R +A    ++L +L+  E    GI +LK+ YN V G+Y++V+      V
Sbjct: 428 NEGVNEELDELRAIAFSGKDYLAQLQQREIKNTGISSLKIAYNKVFGYYLEVTHAHKDKV 487

Query: 493 PPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALALEKQLWEELFDLLMPHLEQLQQL 552
           P  ++R+QTL NAERYI EELK +E+K+LN++ R   +E  L+ EL    M ++ Q+QQ 
Sbjct: 488 PSTWIRKQTLVNAERYITEELKTYEEKILNAEERIYTIEFGLFNELVLYAMDYVAQVQQN 547

Query: 553 AASVAQLDVLQNLAERAENLEYCRPTLVQEAGIHIQGGRHPVVER--VMNEPFIANPIEL 610
           A  +  +D L   A  A +  Y +P +     + I+ GRHPV+E+   + E ++ N I L
Sbjct: 548 AKVIGVIDCLSAFAGIALSSSYVKPEVNDTHVLDIRKGRHPVIEKQLPLGEAYVPNDIFL 607

Query: 611 -NPQRRMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESASIGPLDRIFTRIGASDD 669
            + Q++++IITGPNM GKS  +RQTAL+ LMA IGS+VPAE+A+IG +D+IFTR+GASD+
Sbjct: 608 DDEQQQVIIITGPNMAGKSALLRQTALVVLMAQIGSFVPAEAATIGVIDKIFTRVGASDN 667

Query: 670 LASGRSTFMVEMTETANILHNATRNSLVLMDEIGRGTSTYDGLSLAWASAEWLAK--EIG 727
           L+ G STFMVEMTETA+IL+N +  SLVLMDEIGRGTSTYDG+S+AWA  E L    +  
Sbjct: 668 LSKGESTFMVEMTETASILNNLSDRSLVLMDEIGRGTSTYDGISIAWAIVEHLHNHPKYK 727

Query: 728 AMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGAASKSYGLAVAGLAG 787
           A TLFATHY EL +L   LP + N ++   E G  I FM  +  G +  S+G+ VA +AG
Sbjct: 728 AKTLFATHYHELNQLAEELPRVKNYNVSVREAGGKILFMRKLVPGGSEHSFGIHVAQMAG 787

Query: 788 VPKPVIKNARAKLQQL--ELLSSQPAETRKPSRVDIANQLSLI----PEPSAVEQALAGV 841
           +P  V+  A   +  L  E +S Q  + +  +      QLS+     P+   V++ +  +
Sbjct: 788 MPNNVVLRADEIMHHLEKEKVSEQAPQQKMKTAPKNNFQLSMFELHDPQLERVKELMEQL 847

Query: 842 DPDQLTPRQALDMLYQLKKLL 862
           D + +TP +AL  L +LK LL
Sbjct: 848 DINTITPVEALLKLNELKLLL 868