Pairwise Alignments

Query, 862 a.a., DNA mismatch repair protein MutS from Vibrio cholerae E7946 ATCC 55056

Subject, 855 a.a., DNA mismatch repair protein MutS from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 1202 bits (3109), Expect = 0.0
 Identities = 613/861 (71%), Positives = 714/861 (82%), Gaps = 10/861 (1%)

Query: 5   NASPSESLSHHTPMMQQYLRLKAENPDILLFYRMGDFYELFYDDAKRASELLDISLTKRG 64
           N S  +  S+HTPMMQQYL+LKA++P+ILLFYRMGDFYELFYDDAKRAS+LLDISLTKRG
Sbjct: 2   NESFDKDFSNHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRG 61

Query: 65  ASAGEPIPMAGVPFHAVEGYLAKLVQMGESVAICEQIGDPATSKGPVERKVVRIVTPGTV 124
           ASAGEPIPMAG+P HAVE YLAKLV  GESVAICEQIGDPATSKGPVERKVVRIVTPGT+
Sbjct: 62  ASAGEPIPMAGIPHHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTI 121

Query: 125 TDEALLSERVDNLIAAIYHHNGRFGYATMDITSGRFQLSEPQTEEEMAAELQRTSPRELL 184
           +DEALL ER DNL+AAI+     +GYAT+DI+SGRF+LSEP   E MAAELQRT+P ELL
Sbjct: 122 SDEALLQERQDNLLAAIWQDGKGYGYATLDISSGRFRLSEPADRETMAAELQRTNPAELL 181

Query: 185 FPEDFSPVHLMASRQGNRRRPIWEFELDTAKQQLNQQFGTRDLVGFGVEQAKLGLCAAGC 244
           + EDF+ + L+  R+G RRRP+WEFE+DTA+QQLN QFGTRDLVGFGVE A  GLCAAGC
Sbjct: 182 YAEDFAEMALIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENASRGLCAAGC 241

Query: 245 LIQYVKDTQRTALPHIRSLTWDRQDQSVILDAATRRNLELTHNLAGGTDNTLAEVLDHCA 304
           L+QYVKDTQRT+LPHIRS+T +RQ  S+I+DAATRRNLE+T NLAGG +NTLA VLD   
Sbjct: 242 LLQYVKDTQRTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGVENTLAAVLDCTV 301

Query: 305 TPMGSRMLKRWIHQPMRDNATLNQRLDAITELKETALYGELHPVLKQIGDIERILARLAL 364
           TPMGSRMLKRW+H P+R+   L +R   I  L++T    EL PVL+Q+GD+ERILARLAL
Sbjct: 302 TPMGSRMLKRWLHMPVRNTDILRERQQTIGALQDTV--SELQPVLRQVGDLERILARLAL 359

Query: 365 RSARPRDLARLRHAMQQLPELHSVMSELKQPHLTELRTHAEPMDELCDLLERAIKENPPV 424
           R+ARPRDLAR+RHA QQLPELH+ +  +    +  LR       EL DLLERAI + PPV
Sbjct: 360 RTARPRDLARMRHAFQQLPELHAQLETVDSAPVQALRKKMGDFAELRDLLERAIIDAPPV 419

Query: 425 VIRDGGVIADGYSAELDEWRDLANGATEFLERLEAEERDRHGIDTLKVGYNNVHGFYIQV 484
           ++RDGGVIA GY  ELDEWR LA+GAT++L+RLE  ER+R G+DTLKVGYN VHG+YIQ+
Sbjct: 420 LVRDGGVIAPGYHEELDEWRALADGATDYLDRLEIRERERTGLDTLKVGYNAVHGYYIQI 479

Query: 485 SRGQSHLVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALALEKQLWEELFDLLMP 544
           SRGQSHL P +YVRRQTLKNAERYII ELK++EDKVL SK +ALALEKQL++ELFDLL+P
Sbjct: 480 SRGQSHLAPINYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLP 539

Query: 545 HLEQLQQLAASVAQLDVLQNLAERAENLEYCRPTLVQEAGIHIQGGRHPVVERVMNEPFI 604
           HL  LQQ A ++A+LDVL NLAERA  L Y  PT   + GI I  GRHPVVE+V+NEPFI
Sbjct: 540 HLADLQQSANALAELDVLVNLAERAWTLNYTCPTFTDKPGIRITEGRHPVVEQVLNEPFI 599

Query: 605 ANPIELNPQRRMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESASIGPLDRIFTRI 664
           ANP+ L+PQRRMLIITGPNMGGKSTYMRQTALIAL+A+IGSYVPA++  IGP+DRIFTR+
Sbjct: 600 ANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQNVEIGPIDRIFTRV 659

Query: 665 GASDDLASGRSTFMVEMTETANILHNATRNSLVLMDEIGRGTSTYDGLSLAWASAEWLAK 724
           GA+DDLASGRSTFMVEMTETANILHNAT NSLVLMDEIGRGTSTYDGLSLAWA AE LA 
Sbjct: 660 GAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLAN 719

Query: 725 EIGAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGAASKSYGLAVAG 784
           +I A+TLFATHYFELT+LP  +  +ANVHLDA+EHGD IAFMH+VQ+GAASKSYGLAVA 
Sbjct: 720 KIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAA 779

Query: 785 LAGVPKPVIKNARAKLQQLELLSSQPAETRKPSRVDIANQLSLIPEP---SAVEQALAGV 841
           LAGVPK VIK AR KL++LE +S   A T    +VD   Q+SL+  P   S   +AL  +
Sbjct: 780 LAGVPKEVIKRARQKLRELESISPNAAAT----QVD-GTQMSLLAAPEETSPAVEALENL 834

Query: 842 DPDQLTPRQALDMLYQLKKLL 862
           DPD LTPRQAL+ +Y+LK L+
Sbjct: 835 DPDSLTPRQALEWIYRLKSLV 855