Pairwise Alignments

Query, 862 a.a., DNA mismatch repair protein MutS from Vibrio cholerae E7946 ATCC 55056

Subject, 853 a.a., DNA mismatch repair protein (NCBI) from Escherichia coli BW25113

 Score = 1198 bits (3099), Expect = 0.0
 Identities = 611/859 (71%), Positives = 711/859 (82%), Gaps = 10/859 (1%)

Query: 7   SPSESLSHHTPMMQQYLRLKAENPDILLFYRMGDFYELFYDDAKRASELLDISLTKRGAS 66
           S  E+   HTPMMQQYLRLKA++P+ILLFYRMGDFYELFYDDAKRAS+LLDISLTKRGAS
Sbjct: 2   SAIENFDAHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGAS 61

Query: 67  AGEPIPMAGVPFHAVEGYLAKLVQMGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTD 126
           AGEPIPMAG+P+HAVE YLAKLV  GESVAICEQIGDPATSKGPVERKVVRIVTPGT++D
Sbjct: 62  AGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISD 121

Query: 127 EALLSERVDNLIAAIYHHNGRFGYATMDITSGRFQLSEPQTEEEMAAELQRTSPRELLFP 186
           EALL ER DNL+AAI+  +  FGYAT+DI+SGRF+LSEP   E MAAELQRT+P ELL+ 
Sbjct: 122 EALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLYA 181

Query: 187 EDFSPVHLMASRQGNRRRPIWEFELDTAKQQLNQQFGTRDLVGFGVEQAKLGLCAAGCLI 246
           EDF+ + L+  R+G RRRP+WEFE+DTA+QQLN QFGTRDLVGFGVE A  GLCAAGCL+
Sbjct: 182 EDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLL 241

Query: 247 QYVKDTQRTALPHIRSLTWDRQDQSVILDAATRRNLELTHNLAGGTDNTLAEVLDHCATP 306
           QY KDTQRT LPHIRS+T +R+  S+I+DAATRRNLE+T NLAGG +NTLA VLD   TP
Sbjct: 242 QYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRNLEITQNLAGGAENTLASVLDCTVTP 301

Query: 307 MGSRMLKRWIHQPMRDNATLNQRLDAITELKETALYGELHPVLKQIGDIERILARLALRS 366
           MGSRMLKRW+H P+RD   L +R   I  L++      L PVL+Q+GD+ERILARLALR+
Sbjct: 302 MGSRMLKRWLHMPVRDTRVLLERQQTIGALQDFT--AGLQPVLRQVGDLERILARLALRT 359

Query: 367 ARPRDLARLRHAMQQLPELHSVMSELKQPHLTELRTHAEPMDELCDLLERAIKENPPVVI 426
           ARPRDLAR+RHA QQLPEL + +  +    +  LR       EL DLLERAI + PPV++
Sbjct: 360 ARPRDLARMRHAFQQLPELRAQLETVDSAPVQALREKMGEFAELRDLLERAIIDTPPVLV 419

Query: 427 RDGGVIADGYSAELDEWRDLANGATEFLERLEAEERDRHGIDTLKVGYNNVHGFYIQVSR 486
           RDGGVIA GY+ ELDEWR LA+GAT++LERLE  ER+R G+DTLKVG+N VHG+YIQ+SR
Sbjct: 420 RDGGVIASGYNEELDEWRALADGATDYLERLEVRERERTGLDTLKVGFNAVHGYYIQISR 479

Query: 487 GQSHLVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALALEKQLWEELFDLLMPHL 546
           GQSHL P +Y+RRQTLKNAERYII ELK++EDKVL SK +ALALEKQL+EELFDLL+PHL
Sbjct: 480 GQSHLAPINYMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHL 539

Query: 547 EQLQQLAASVAQLDVLQNLAERAENLEYCRPTLVQEAGIHIQGGRHPVVERVMNEPFIAN 606
           E LQQ A+++A+LDVL NLAERA  L Y  PT + + GI I  GRHPVVE+V+NEPFIAN
Sbjct: 540 EALQQSASALAELDVLVNLAERAYTLNYTCPTFIDKPGIRITEGRHPVVEQVLNEPFIAN 599

Query: 607 PIELNPQRRMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESASIGPLDRIFTRIGA 666
           P+ L+PQRRMLIITGPNMGGKSTYMRQTALIALMA+IGSYVPA+   IGP+DRIFTR+GA
Sbjct: 600 PLNLSPQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGA 659

Query: 667 SDDLASGRSTFMVEMTETANILHNATRNSLVLMDEIGRGTSTYDGLSLAWASAEWLAKEI 726
           +DDLASGRSTFMVEMTETANILHNAT  SLVLMDEIGRGTSTYDGLSLAWA AE LA +I
Sbjct: 660 ADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKI 719

Query: 727 GAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGAASKSYGLAVAGLA 786
            A+TLFATHYFELT+LP  +  +ANVHLDA+EHGD IAFMH+VQ+GAASKSYGLAVA LA
Sbjct: 720 KALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALA 779

Query: 787 GVPKPVIKNARAKLQQLELLSSQPAETRKPSRVDIANQLSLIPEP---SAVEQALAGVDP 843
           GVPK VIK AR KL++LE +S   A T    +VD   Q+SL+  P   S   +AL  +DP
Sbjct: 780 GVPKEVIKRARQKLRELESISPNAAAT----QVD-GTQMSLLSVPEETSPAVEALENLDP 834

Query: 844 DQLTPRQALDMLYQLKKLL 862
           D LTPRQAL+ +Y+LK L+
Sbjct: 835 DSLTPRQALEWIYRLKSLV 853