Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., M23 family peptidase from Rhodanobacter sp. FW510-T8

 Score = 76.3 bits (186), Expect = 9e-19
 Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 2/106 (1%)

Query: 206 FSAGDQGNKGIDIAGQRGQAVVATADGTVVYSGNALRGYGNLIIIKHNEHYLSAYAHNDQ 265
           F      + GIDIA   G  V A A+G V ++G    GYG+++ I H   Y++ YAHN  
Sbjct: 201 FDGRSARHTGIDIATPFGTPVHAVAEGMVTFAGQR-SGYGDVVEIDHGNGYMTRYAHNSA 259

Query: 266 LLAKEGQTVQAGQKIATMGSSG-TNSVRLHFEIRYQGKSVNPKRYL 310
           L  + GQ VQ G  IA  GS+G +    +HFE+ Y G+ VNP  ++
Sbjct: 260 LDVRPGQHVQVGDVIAKAGSTGRSTGSHVHFEVWYDGRVVNPLAFV 305