Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 171 a.a., Murein hydrolase activator NlpD from Variovorax sp. SCN45

 Score =  114 bits (285), Expect = 2e-30
 Identities = 63/129 (48%), Positives = 79/129 (61%), Gaps = 2/129 (1%)

Query: 182 AKAKPSDEKIAKWLWPTKGRVIKNFSAGDQGNKGIDIAGQRGQAVVATADGTVVYSGNAL 241
           AK        A+++ P  G  I  F  GD+  KGIDIAG  G  VVA+ADG VVY G  L
Sbjct: 38  AKPPVVQRPAAQFIRPANGPTIARFD-GDRV-KGIDIAGTLGDPVVASADGRVVYVGGEL 95

Query: 242 RGYGNLIIIKHNEHYLSAYAHNDQLLAKEGQTVQAGQKIATMGSSGTNSVRLHFEIRYQG 301
             YGN++I+KHNE +L+AYAH   +  KEG  V+ G KIA MG S  + V+L FEIR  G
Sbjct: 96  PAYGNMVIVKHNETFLTAYAHLQTIFVKEGTVVRQGDKIAEMGRSNADRVKLRFEIRRNG 155

Query: 302 KSVNPKRYL 310
             V+P+ YL
Sbjct: 156 NPVDPEPYL 164