Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., Murein hydrolase activator NlpD from Variovorax sp. SCN45

 Score =  171 bits (434), Expect = 2e-47
 Identities = 113/298 (37%), Positives = 146/298 (48%), Gaps = 46/298 (15%)

Query: 22  APTPAPVSG--------LGKDYNKVERGSYRGSYYEVKKGDTLYFIAYLTDKDVNDLISY 73
           AP P+ V G         GK    +E     G YY V+ GDT+  I   T +   D++ +
Sbjct: 42  APAPSTVPGGPPITTDANGKPLAGIENYGKPG-YYAVRPGDTIRRIGIETGQRWQDIVRW 100

Query: 74  NDLAPPYTIHPGQKIKLWLPNYTPPAYGGTGGAATVAVASSTSASVAKAATTATVAQTVS 133
           N++  P  I  GQ +++      PP   GT  A     +S +  +V K  T   V   V+
Sbjct: 101 NNIDNPDLIEVGQVLRV-----IPPTGSGTSVAVAPPPSSGSEGAVTKPVTPPPVIAPVT 155

Query: 134 KSSNTKNVQNGSTNSQNLTKKDPVKTVDQTKTKEYVEPVGKQNVNVNVAKAKPSDEKIAK 193
            S+       G+T         P                               DE +  
Sbjct: 156 PST-------GATKPPAPVTASPASP----------------------GSGASGDEDLG- 185

Query: 194 WLWPTKGRVIKNFSAGDQGNKGIDIAGQRGQAVVATADGTVVYSGNALRGYGNLIIIKHN 253
           W+WP  G +I  F   +  NKG DI+G+ G  V+A ADG VVY+G  LRGYGNLII+KHN
Sbjct: 186 WIWPASGSLIAGFD--EAKNKGYDISGKAGDPVLAAADGRVVYAGAGLRGYGNLIILKHN 243

Query: 254 EHYLSAYAHNDQLLAKEGQTVQAGQKIATMGSSGTNSVRLHFEIRYQGKSVNPKRYLP 311
             YL+AYAHN  LL KE Q+VQ GQKIA MGSS  + V+LHFEIR QGK V+P RYLP
Sbjct: 244 NTYLTAYAHNQTLLVKEDQSVQKGQKIAEMGSSDADRVKLHFEIRRQGKPVDPSRYLP 301