Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., peptidoglycan DD-metalloendopeptidase family protein from Variovorax sp. OAS795

 Score = 74.7 bits (182), Expect = 4e-18
 Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 2/95 (2%)

Query: 213 NKGIDIAGQRGQAVVATADGTVVYSGNALRGYGNLIIIKHNEHYLSAYAHNDQLLAKEGQ 272
           + GID A   G AV +  DGTV ++G    GYGN++IIKH  +  +AYAH  ++  K G 
Sbjct: 312 HNGIDFAAPTGTAVRSVGDGTVDFAGTQ-NGYGNIVIIKHRNNQQTAYAHLSRVDVKAGD 370

Query: 273 TVQAGQKIATMGSSG-TNSVRLHFEIRYQGKSVNP 306
           +V  GQ +  +GS+G      LHFE R  G+  +P
Sbjct: 371 SVSQGQTVGAVGSTGWATGPHLHFEFRVNGEYQDP 405