Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., Peptidase M23B from Sphingobium sp. HT1-2

 Score =  119 bits (297), Expect = 1e-31
 Identities = 89/297 (29%), Positives = 128/297 (43%), Gaps = 39/297 (13%)

Query: 46  SYYEVKKGDTLYFIAYLTDKDVNDLISYNDLAPPYTIHPGQKIKLWLPNYTPPAYGGTGG 105
           S Y V+ GDTL  I   T    + +   N LAPPY + PGQ + +    Y   A G TG 
Sbjct: 89  SLYSVQPGDTLRGIGNRTGAGSDAIARANGLAPPYALRPGQSLSIPGGRYHAVAEGETGI 148

Query: 106 AATVAVA----------------------------SSTSASVAKAATTATVAQTVSKSSN 137
           A  VA                                T A+   AA     A ++ + + 
Sbjct: 149 AIAVAYGVRWSDIVDINGLSEPYVLRRGQRLLLPGGETPAAPVAAAPVRAPASSLEQRAA 208

Query: 138 TKNVQNGSTNSQNLTKKDPVKTVDQTKTKEYVEPVGKQNVNVNVAKAKPSDEKIAKWLWP 197
              +         LT   P    ++ +T    +P   + +  NVA A+P       + WP
Sbjct: 209 AFRIDIDDV----LTGGQPAVAEEKPRTVAKAQP---RPLPSNVAIAQPGGFS-GPFAWP 260

Query: 198 TKGRVIKNFSAGDQG--NKGIDIAGQRGQAVVATADGTVVYSGNALRGYGNLIIIKHNEH 255
            KG +I  F  G+ G  N GIDIA   G  + A ADG V Y+G+++  +G LI+I H   
Sbjct: 261 LKGNIISRFGPGESGAKNNGIDIAAPIGTPIRAAADGVVAYAGDSIAVFGGLILITHGSG 320

Query: 256 YLSAYAHNDQLLAKEGQTVQAGQKIATMGSSG-TNSVRLHFEIRYQGKSVNPKRYLP 311
           ++SAY H +++    GQ V  GQ I   G +G  +  +LHFE+R     +NP   LP
Sbjct: 321 WVSAYGHANRIDVVRGQKVTKGQVIGLSGDTGYASKPKLHFELRKDRVPINPMTQLP 377