Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., M23 family peptidase from Magnetospirillum magneticum AMB-1

 Score =  134 bits (336), Expect = 4e-36
 Identities = 107/339 (31%), Positives = 151/339 (44%), Gaps = 55/339 (16%)

Query: 10  LLLFCSLLFGCTAPTPAPVSGLGKDYNKVERGSYRGSYYEVKKGDTLYFIAYLTDKDVND 69
           LL+  + +  CT    + V  +G+    ++    R +   V  GDT+Y IA      V D
Sbjct: 24  LLILAAAISACTPSYDSKVP-VGRSDGPLQ--VQRPATVTVYAGDTVYSIARRYSLTVRD 80

Query: 70  LISYNDLAPPYTIHPGQKIKLWLPNYTPPAYGGTGGAATVAVASSTSASVAKAATTATVA 129
           LI  N+L PPY + PG  ++L             GG +   V    + SV   A    V 
Sbjct: 81  LIETNNLQPPYQLQPGTVLRL------------PGGGSDYVVQRGDTLSVL--ARRFKVD 126

Query: 130 QTVSKSSNTKNVQNGSTNSQNLTKKDPVKTVDQTKT------------------------ 165
                ++N K         + LT   P  +V QT                          
Sbjct: 127 FNSLAATNGKRAPYVLQVGERLTIPGPKASVTQTAATPAPATGGGSMVVTSPHASGGAGG 186

Query: 166 -----KEYVEPVGKQNVN-----VNVAKAKPSDEKIAKWLWPTKGRVIKNFS---AGDQG 212
                K  V PV  Q  +          A P     + +LWP KG V+  F       Q 
Sbjct: 187 GKPAAKAEVPPVYAQAPSHPAPPPAAVPAVPPARAGSTFLWPVKGEVVAEFGPLPGKGQH 246

Query: 213 NKGIDIAGQRGQAVVATADGTVVYSGNALRGYGNLIIIKHNEHYLSAYAHNDQLLAKEGQ 272
           N GI+I   +G  V A  +G V Y GN L+G+GNL++IKH +++++AYAHNDQL+ K G 
Sbjct: 247 NDGINIVAAKGTPVRAAENGVVAYVGNELKGFGNLLLIKHADNWMTAYAHNDQLMVKRGD 306

Query: 273 TVQAGQKIATMGSSGT-NSVRLHFEIRYQGKSVNPKRYL 310
            V+ GQ IAT+G+SG+  S +LHFEIR   ++VNP  YL
Sbjct: 307 RVRRGQTIATLGASGSVTSPQLHFEIRRGTEAVNPVEYL 345