Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., Lipoprotein NlpD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  251 bits (640), Expect = 2e-71
 Identities = 136/282 (48%), Positives = 177/282 (62%), Gaps = 14/282 (4%)

Query: 33  KDYNKVERGSYRG-SYYEVKKGDTLYFIAYLTDKDVNDLISYNDLAPPYTIHPGQKIKLW 91
           + Y  + +GSY G S Y VKKGDTL++IA++T  D  DL   N ++ PY+++ GQ +++ 
Sbjct: 47  RQYGNIPKGSYTGGSTYTVKKGDTLFYIAWITGNDFRDLAQRNSISAPYSLNVGQTLQVG 106

Query: 92  LPNYTPPAYGGTGGAATVAVASSTSASVAKAATTATVAQTVSKSSNTKNVQNGSTNSQNL 151
             + TP     TGG A     ++    V ++A  +TVA     +          + ++ L
Sbjct: 107 NASGTPI----TGGNAITQADAAQQGVVTRSAQNSTVAVASQPTITYSEGSGEQSANKML 162

Query: 152 TKKDPVKTVDQTKTKEYVEPVGKQNVNVNVAKAKPSDEK--IAKWLWPTKGRVIKNFSAG 209
               P  TV          PV    V+     A  +     I+ W WPT G+VI+NF A 
Sbjct: 163 PNNKPAGTV-------VTAPVTAPTVSTTEPNASSTSTSAPISAWRWPTDGKVIENFGAS 215

Query: 210 DQGNKGIDIAGQRGQAVVATADGTVVYSGNALRGYGNLIIIKHNEHYLSAYAHNDQLLAK 269
           + GNKGIDIAG +GQA+VATADG VVY+GNALRGYGNLIIIKHN+ YLSAYAHND +L +
Sbjct: 216 EGGNKGIDIAGSKGQAIVATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVR 275

Query: 270 EGQTVQAGQKIATMGSSGTNSVRLHFEIRYQGKSVNPKRYLP 311
           E Q V+AGQKIATMGS+GT+S RLHFEIRY+GKSVNP RYLP
Sbjct: 276 EQQEVKAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLRYLP 317