Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., Membrane proteins related to metalloendopeptidases from Kangiella aquimarina DSM 16071

 Score =  190 bits (482), Expect = 5e-53
 Identities = 118/306 (38%), Positives = 160/306 (52%), Gaps = 13/306 (4%)

Query: 17  LFGCTAPTPAPVSGLGKDYNKVERGSY--------RGSYYEVKKGDTLYFIAYLTDKDVN 68
           L GC     APV     + +K +  S+           YY V+ GDTLY IA+    D N
Sbjct: 29  LQGCGNERLAPVEEREANNHKAQLHSFYPPSEVDNSQQYYYVRPGDTLYSIAFRYGLDYN 88

Query: 69  DLISYNDLAPPYTIHPGQKIKLWLP-NYTPPAYGGTGGAATVAVASSTSASVAKAATTAT 127
            L   ND+   YTIH GQ++ L    + TP       G        ST AS     T A 
Sbjct: 89  ILAQANDIDSNYTIHAGQRLNLQRARDITPAEDYEVAGTEPPGTQQSTDASRRTPVTVAR 148

Query: 128 VAQTVSKSSNTKNVQNGSTNSQNLTKKDPVKTVDQTKTKEYVEPVGKQNVNVNVAK--AK 185
              T    + T N Q  ST+  +     PV    + K +   EPV   N +    +  A 
Sbjct: 149 RPVTEVPRTPTGN-QTQSTSQPSTQPTQPVAQ-QEPKKEPKKEPVTNSNTSGGSKEPIAY 206

Query: 186 PSDEKIAKWLWPTKGRVIKNFSAGDQGNKGIDIAGQRGQAVVATADGTVVYSGNALRGYG 245
             +  +  W+WPT G++++ FS   + +KGIDIAG  G  V A A G VVY+G  LRGYG
Sbjct: 207 TPNSPVKYWMWPTMGQILQGFSGASKSSKGIDIAGNIGDPVRAAAAGRVVYAGRGLRGYG 266

Query: 246 NLIIIKHNEHYLSAYAHNDQLLAKEGQTVQAGQKIATMGSSGTNSVRLHFEIRYQGKSVN 305
           NL+I+KHN  ++SAYAHN  LL KE + ++AGQKIA +G++ +   +LHFEIR++GK V+
Sbjct: 267 NLVIVKHNNDFISAYAHNRVLLVKENEIIKAGQKIAEVGNTDSEVPKLHFEIRFKGKPVD 326

Query: 306 PKRYLP 311
           P RYLP
Sbjct: 327 PMRYLP 332