Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., Membrane proteins related to metalloendopeptidases from Enterobacter asburiae PDN3

 Score =  250 bits (638), Expect = 4e-71
 Identities = 138/281 (49%), Positives = 175/281 (62%), Gaps = 12/281 (4%)

Query: 33  KDYNKVERGSYRG-SYYEVKKGDTLYFIAYLTDKDVNDLISYNDLAPPYTIHPGQKIKLW 91
           + Y  + +GSY G S Y VK+GDTL++IA++T  D  DL   N++  PY +  GQ +++ 
Sbjct: 102 RQYGNIPKGSYTGGSTYTVKRGDTLFYIAWITGNDFRDLAQRNNVQAPYGLEVGQTLQVG 161

Query: 92  LPNYTPPAYGGTGGAATVAVASSTSASVAKAATTATVAQTVSKSSNTKNVQNGSTNSQNL 151
               TP   G T  AA V  A + S   A+ +TT   +Q V   S     Q  +    N 
Sbjct: 162 NATGTPLTPGNTVSAADVT-AQNNSVKPAQKSTTVVASQPVITYSEDSGDQTANKMLPNN 220

Query: 152 TKKDPVKTVDQTK-TKEYVEPVGKQNVNVNVAKAKPSDEKIAKWLWPTKGRVIKNFSAGD 210
                V T   T       EP          A +  S   I+ W WPT G+VI+NFS+ +
Sbjct: 221 KGTATVVTAPVTAPVVSSTEPT---------ASSMTSSSPISAWRWPTDGKVIENFSSSE 271

Query: 211 QGNKGIDIAGQRGQAVVATADGTVVYSGNALRGYGNLIIIKHNEHYLSAYAHNDQLLAKE 270
            GNKGIDIAG +GQA++ATADG VVY+GNALRGYGNLIIIKHN+ YLSAYAHND +L +E
Sbjct: 272 GGNKGIDIAGSKGQAIIATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVRE 331

Query: 271 GQTVQAGQKIATMGSSGTNSVRLHFEIRYQGKSVNPKRYLP 311
            Q V+AGQKIATMGS+GT+S RLHFEIRY+GKSVNP +YLP
Sbjct: 332 QQEVKAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLQYLP 372