Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., Murein hydrolase activator NlpD precursor from Alteromonas macleodii MIT1002

 Score =  235 bits (600), Expect = 8e-67
 Identities = 140/308 (45%), Positives = 185/308 (60%), Gaps = 33/308 (10%)

Query: 8   LGLLLF-CSLLFGCTAPT-PAPVSGLGKDYNKVERGS--YRGSYYEVKKGDTLYFIAYLT 63
           +G+LL+ C L+ GC   + PAPV  L    ++V  GS  Y    Y+V++GDTLY +A+ T
Sbjct: 8   IGILLYICVLIGGCAGRSAPAPVVLLN---SQVSDGSEEYTKKTYKVQRGDTLYAVAWYT 64

Query: 64  DKDVNDLISYNDLAPPYTIHPGQKIKLWLPNYTPPAYGGTGGAATVAVASSTSASVAKAA 123
             D  DL  YN L+ PYTI PGQ +     N TPP+   T   A V   S T+ S     
Sbjct: 65  GNDYRDLAKYNQLSAPYTIFPGQVL-----NVTPPSNVAT---APVIPKSKTNQS----- 111

Query: 124 TTATVAQTVSKSSNTKNVQNGSTNSQNLTKKDPVKTVDQTKTKEYVEPVGKQNVNVNVAK 183
            TA     V KS   +        S+ + K   V TV +            Q+V      
Sbjct: 112 -TAPTTSNVDKSLVDRPQPQAYRESEKVVKPQNVTTVKKPS----------QSVKKQTPT 160

Query: 184 AKPSDEKIAKWLWPTKGRVIKNFSAGDQGNKGIDIAGQRGQAVVATADGTVVYSGNALRG 243
           + P  +K+ +W+WP +G+V+  FS  + GNKGIDIAG +G  VVA ADG VVYSG+ALRG
Sbjct: 161 SFP--DKVQEWVWPAEGKVVGTFSKSESGNKGIDIAGVKGSKVVAAADGKVVYSGSALRG 218

Query: 244 YGNLIIIKHNEHYLSAYAHNDQLLAKEGQTVQAGQKIATMGSSGTNSVRLHFEIRYQGKS 303
           YGNL+IIKH + +LSAYA+ND +L KE + V AGQ+IATMG SGTNSV+LHFE+RY+GKS
Sbjct: 219 YGNLVIIKHTDTFLSAYAYNDTILVKEREWVSAGQQIATMGDSGTNSVKLHFEVRYRGKS 278

Query: 304 VNPKRYLP 311
           ++P +YLP
Sbjct: 279 LDPMKYLP 286