Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 537 a.a., lipoprotein from Agrobacterium fabrum C58

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 26/229 (11%)

Query: 107 ATVAVASSTSASVAKAAT-----TATVAQTVSK-SSNTKNVQNGSTNSQNLTKKDPVKTV 160
           A +A A+  S +  KAA      +  V QT++   ++T  ++  S  ++      PV+T 
Sbjct: 309 AKIARANGVSVAALKAANGISNESIRVGQTLAMPGASTDAIKTASVPAKEAAAAKPVETA 368

Query: 161 DQTKTKEYVEPVGKQNV----------------NVNVAKAKPSDEKIAKWLWPTKGRVIK 204
              K + Y  P                        ++A   P    I K+ WP +G VI 
Sbjct: 369 S-IKPEPYKAPAAAATTAAPATPATASVSDIEKKADMASIAPESTGIGKYRWPVRGAVIN 427

Query: 205 NFSAGDQG--NKGIDIAGQRGQAVVATADGTVVYSGNALRGYGNLIIIKHNEHYLSAYAH 262
           NF    +G  N GI+I+   G  + A  +G V+Y+GN L+  GN ++++H++  ++ Y +
Sbjct: 428 NFGDNVEGSRNDGINISVPEGTPIKAAENGVVIYAGNGLKQLGNTVLVRHDDGKVTVYGN 487

Query: 263 NDQLLAKEGQTVQAGQKIATMGSSGT-NSVRLHFEIRYQGKSVNPKRYL 310
              L  + GQ VQ GQ IAT G +G+    ++HFE+R     VNP  +L
Sbjct: 488 AANLDVQRGQKVQRGQTIATSGMTGSAKRPQVHFEVRKDATPVNPSGFL 536