Pairwise Alignments

Query, 311 a.a., murein hydrolase activator NlpD from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., Murein hydrolase activator NlpD from Acinetobacter radioresistens SK82

 Score =  128 bits (322), Expect = 1e-34
 Identities = 91/276 (32%), Positives = 123/276 (44%), Gaps = 47/276 (17%)

Query: 36  NKVERGSYRGSYYEVKKGDTLYFIAYLTDKDVNDLISYNDLAPPYTIHPGQKIKLWLPNY 95
           N   R +    YY V+ GDTL  IA         +   ND++ PY I+  Q ++L     
Sbjct: 43  NNPTRYATAPDYYTVRSGDTLSGIAARYGLSYLSIAEMNDISAPYRIYVNQSLRL----- 97

Query: 96  TPPAYGGTGGAATVAVASSTSASVAKAATTATVAQTVSKSSNTKNVQNGSTNSQNLTKKD 155
                            S T  S  ++ T A   Q    +               L    
Sbjct: 98  ---------------KNSGTRRSQTQSMTQAAPIQRQRVA---------------LPTPP 127

Query: 156 PVKTVDQTKTKEYVEPVGKQNVNVNVAKAKPSDEKIAKWLWPTKGRVIKNFSAGDQGNKG 215
           PV T  +T     V+P            + P      +W+ P  G V++ ++      KG
Sbjct: 128 PVTTTTRTT----VQPTSP-------TPSIPVRSTTLRWVKPANGPVLQAYNPVSN-IKG 175

Query: 216 IDIAGQRGQAVVATADGTVVYSGNALRGYGNLIIIKHNEHYLSAYAHNDQLLAKEGQTVQ 275
              +G  G  V A ADG VVY+ + L+ YGNL++IKH + Y+SAYAHN ++L K G  V 
Sbjct: 176 TRFSGNLGDPVFAAADGQVVYAADGLKEYGNLVLIKHIDGYISAYAHNSKMLVKSGDNVT 235

Query: 276 AGQKIATMGSSGTNSVRLHFEIRYQGKSVNPKRYLP 311
           AGQKIA MGSSGTN V L F+IR  GK +NP   LP
Sbjct: 236 AGQKIAEMGSSGTNQVMLEFQIRLDGKPINPASILP 271