Pairwise Alignments

Query, 361 a.a., tRNA pseudouridine(13) synthase TruD from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., Uncharacterized conserved protein from Kangiella aquimarina DSM 16071

 Score =  181 bits (459), Expect = 3e-50
 Identities = 119/341 (34%), Positives = 182/341 (53%), Gaps = 15/341 (4%)

Query: 7   PLAYLCGKPTAKAKLKALPEHFQVNEVLGYSLTGHGEHLMVRIRKTGENTSFVANELAKA 66
           P AY  G P A A  +     F V+E L +  +G G H ++ I K   NT  V ++L + 
Sbjct: 9   PRAY--GAPLASATFRQQLSDFCVDEELRFEPSGEGAHHLLLIEKRNINTDIVCHKLRRF 66

Query: 67  CGVPSRAVSWAGLKDRHAVTEQWLSVHLPNGETPDFSAFLAQYPSIEILEVTRHDKKLRP 126
             V +  + +AG KDR A+  QW SV LP  +  D++ F      + +L+ TRHDKKLR 
Sbjct: 67  AEVNTTDIGYAGKKDRFAIARQWFSVQLPLLKEIDWTEF--NDDEVTVLKATRHDKKLRI 124

Query: 127 GDLQGNEFVVTLSEV-----SDVAAVLSRLETVAELGVPNYFGSQRFGRHGNNLSEARRW 181
           G ++ N F +TL ++     +D  ++  R+  + + G  NYFG QRFGR+G+NL+     
Sbjct: 125 GAVKQNHFKITLRDIGFKEGADKNSLEQRIAKIQQHGFANYFGEQRFGRNGDNLARGVDL 184

Query: 182 GRDNVRSRNQNQRSLYLSAARSWIFNQIVSKRIEQGCFARFIEGDIALAE--QQMFNVDG 239
              N + +N+N + L  SA RS++FNQ+V+KRIE G F+  ++GD    +  +  F V  
Sbjct: 185 LLANKKLKNRNLQGLLFSAVRSFLFNQVVAKRIEAGQFSELLDGDYVQLDGSESGFTVQ- 243

Query: 240 DLALWDQRLQAGEVAISAALAGDNALPTSGQALPLEQAELDAEPDLMALIRGNRMRHDRR 299
           DL+    R  A ++  +A + G        +A   E A L+    ++  +    +  +RR
Sbjct: 244 DLSQELPRFTAKDIHPTAPMPGRGRSQVLAKAAEFESAVLEPFQPIIDALERKGLNGERR 303

Query: 300 AIALKAQN--LSWQVQEDQITLRFSLDAGSFATSLVRELIE 338
           AI +  QN  L W   E  + +RFSL  G+FATSL+REL E
Sbjct: 304 AIRVFPQNVILQWH-NEQTLEMRFSLPKGAFATSLLRELFE 343