Pairwise Alignments

Query, 270 a.a., 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway from Variovorax sp. SCN45

 Score = 60.5 bits (145), Expect = 4e-14
 Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 12/239 (5%)

Query: 35  WAPQVAAL-SQRYRCIVPDFWAHGASEAAPTAMSNLKDYAQHMLALMDHLQIEYFSVIGL 93
           W PQ+ AL +  +R +  D    G S AA      ++D A+ +L ++D  +       G 
Sbjct: 31  WQPQLGALIAAGHRVVAYDQRGTGRSPAALPEAYAIEDMARDVLEILDATRTAQCHFAGH 90

Query: 94  SVGGMWGAELALLAPKRVQSLVMMDTFVGLEPEVTHKKYFTMLDTIAQLQAV-PAPIVEA 152
           ++GG+ G  LAL AP RV SLV+++ +   +P     + F     +A L AV P   VEA
Sbjct: 91  ALGGLVGLRLALDAPARVASLVLVNAW--SKPNPHSARCFDA--RLALLGAVGPRAYVEA 146

Query: 153 VVPMFF--ASNTLKNELPVVAQFRSALQGLSGERAVEVARLGRMIFGRRDLMDEIEHLTL 210
             P+F   A+    +   V  +   A     GE  +         F   D+   +  +T 
Sbjct: 147 -QPIFLYPAAWCAAHAKRVADEVDHAFAHFPGEANMRARIAALRAF---DIDARLGDITA 202

Query: 211 PVLIMVGSEDTPRPALESYLMQDTIRGSQLEVIEGAGHISSLEQAESVTHHLQTFLATV 269
           P L+    +D   P   S  + D +  + L ++   GH  S+ +A++    L  FL+ V
Sbjct: 203 PTLVAAAKDDVLVPWTCSQRLADELPNATLNLMAHGGHAHSVTEADAFNSTLLAFLSRV 261