Pairwise Alignments

Query, 339 a.a., tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  338 bits (866), Expect = 2e-97
 Identities = 176/360 (48%), Positives = 230/360 (63%), Gaps = 26/360 (7%)

Query: 1   MRIIGIETSCDETGIAIYDDEKG----LLSHKLYSQVKLHADYGGVVPELASRDHVKKTI 56
           MRI+GIE+SCDETG+A+ D        LL H L+SQ+++H  YGGVVPELASRDH+++ +
Sbjct: 1   MRILGIESSCDETGVALVDASGSATPRLLGHALHSQIEMHQAYGGVVPELASRDHIRRVL 60

Query: 57  PLIKAAMAEANVTPQDLDGVAFTAGPGLVGALLVGATIGRSLAYAWDVPAVPVHHMEGHL 116
           PL  A +A+A +    +D VA+T GPGL GALLVG+ +  +L +A   P + VHH+EGHL
Sbjct: 61  PLTDAVLAQAGLPLSAVDAVAYTRGPGLAGALLVGSGVACALGFALGKPVIGVHHLEGHL 120

Query: 117 LAPMLEENPPPFPFVALLVSGGHTMLVEVKNIGEYRILGESIDDAAGEAFDKTAKLMGLD 176
           L+P L  +PP FPFVALLVSGGH+ L+ V  +G Y +LGE+IDDAAGEAFDK+AKL+GL 
Sbjct: 121 LSPFLSADPPEFPFVALLVSGGHSQLMRVDGVGRYELLGETIDDAAGEAFDKSAKLLGLP 180

Query: 177 YPGGPLLAKLAEKGTPGRFKFPRPMTDRPGLDMSFSGLKTFTANTI-------------- 222
           YPGGP L++LA++G P  +KFPRP+     LD SF+GLKT     +              
Sbjct: 181 YPGGPALSRLAQQGDPQAYKFPRPLLHSGDLDFSFAGLKTAVLTQVKRLAHAHPDGPATL 240

Query: 223 -AANGDDEQTRADIAYAFQEAVCDTLVIKCKRALEETGLKRVVIAGGVSANKQLRADLEK 281
             A+    Q +AD+A + Q A+ + LV K   A+  TGL+R+V+AGGV AN  LR  L  
Sbjct: 241 HLADPLSAQQKADVAASVQAAIVEVLVKKSFMAIRRTGLRRLVVAGGVGANALLREQLGA 300

Query: 282 LAKKIGGEVYYPRTEFCTDNGAMIAYAGMQR----LKNGDVCELG---LQARPRWPIDQL 334
              + G  V+YP    CTDNGAMIA AG  R    L  GD    G      +PRWP+  L
Sbjct: 301 ACAQAGVRVHYPELHLCTDNGAMIALAGGMRAQAGLAGGDAAGAGGYPFDVKPRWPLSDL 360