Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 597 a.a., DNA primase from Rhodanobacter sp000427505 FW510-R12

 Score =  466 bits (1198), Expect = e-135
 Identities = 259/602 (43%), Positives = 367/602 (60%), Gaps = 37/602 (6%)

Query: 1   MAGHIPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYH 60
           M G IP SFID+LLAR+DIVDVI+ RV LKK G+ ++ACCPFHNE+TPSF VS  KQF+H
Sbjct: 1   MRGLIPDSFIDELLARVDIVDVIERRVPLKKAGREWTACCPFHNERTPSFYVSPAKQFFH 60

Query: 61  CFGCGAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDK 120
           CFGCGAHG+A+ F+M+YER+EFP+A+EELA ++GL V RE      P          EDK
Sbjct: 61  CFGCGAHGSAVKFLMDYERLEFPDAVEELAQSVGLTVPREGGRDERP---------REDK 111

Query: 121 RSLYDLMGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFG 180
             LY L+ +   +Y  +L  P +  A  Y + RGL  E +++F +G+    +D V +  G
Sbjct: 112 TDLYALLDAATAWYEGEL--PRSADAQAYCRKRGLDAETIKRFRLGWAPAGYDGVIKALG 169

Query: 181 QQRSSEDMLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRIT---------- 230
                 ++L  AGM+  ++ G +YDRFR R+MFPI DRRGRVI FGGRI           
Sbjct: 170 NTPRRMELLNEAGMVASSERGSKYDRFRERLMFPILDRRGRVIAFGGRIISSAPPAREDQ 229

Query: 231 ----------EQGTPKYLNSPETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVAL 280
                     +  +PKYLNSPETP+FHKG+EL+ L++V QA  +  +I+VVEGYMDV+AL
Sbjct: 230 EAGIPARTSQQSSSPKYLNSPETPLFHKGRELFALWQVKQANPKLERIVVVEGYMDVIAL 289

Query: 281 AQYGVDYSVASLGTSTTGDHLQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGN 340
            Q G+  +VA+LGT+TT +H ++LFR    V+ C+DGDRAGR AAW+ALE AL  L+ G 
Sbjct: 290 HQAGLPVAVATLGTATTPEHTEVLFRAAPDVVFCFDGDRAGRAAAWKALEAALPRLRDGR 349

Query: 341 ILKFLFLPDGEDPDSYVRKYGKADFEQQVANATPLSQYLFENLIELHQINLGSHEGKSAL 400
              FLFLPDGEDPD+ VRK GK  FE+++  A PLS Y F  L     +++ S +G++ L
Sbjct: 350 QAYFLFLPDGEDPDTLVRKEGKEGFEKRIREAMPLSDYFFNEL--ARDVDMASLDGRARL 407

Query: 401 RAVATPLIDKIPDPFLQEILEKLLDERTGFDHQLRRKKA-RKTENRPAPHKAIKRTPMRD 459
              A PLI ++PD   ++++ + L++R+G    L+   A R+   RP    A++R+ +R 
Sbjct: 408 AERARPLIARLPDGAFRDLMAQELEKRSGARAVLQADPATRRAVQRPT---AVQRSLVRS 464

Query: 460 VIALLIQNPSYAELVPDLASVRHLMIPGLDTFSEVLEKCRQYPHITTGQLLEHWRDSKNE 519
            I+LL+  P  A+ V        L  PG+   +E+L+  R  P I +  L+EH+ +    
Sbjct: 465 AISLLLAQPGMADQVERPYRFLRLDKPGVALLAELLDLARARPGINSAMLVEHFAERPEY 524

Query: 520 TLLSRLASWEIPLVEDNQEELFLDSLDKILAQCVEKQIENLQAKERSVGLSTEEKRELQD 579
             L +L +       + Q   F D+L ++  Q   ++ + L AK R   L   EK EL++
Sbjct: 525 PSLQKLMAALAVGEPEAQRSEFFDALARMEDQAATQRRDALTAKSRESTLDPAEKAELRE 584

Query: 580 LI 581
           L+
Sbjct: 585 LL 586