Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., DNA primase from Xanthobacter sp. DMC5

 Score =  299 bits (765), Expect = 3e-85
 Identities = 166/408 (40%), Positives = 248/408 (60%), Gaps = 13/408 (3%)

Query: 8   SFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYHCFGCGAH 67
           +F+D++ ARL + +V+  RVKLKK+G+ ++   PF+ EKT SF V+ +K FYHCF  G H
Sbjct: 6   AFLDEIRARLPVSEVVGRRVKLKKQGREFAGLSPFNAEKTASFFVNDQKGFYHCFSSGKH 65

Query: 68  GNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDKRSLYDLM 127
           G+  DF+ME E   F EA+E LA+  GL + +E  TP +       A K + +R+LY++M
Sbjct: 66  GDVFDFLMETEGASFGEAVERLAAMAGLSLPQE--TPEA-------AAKEQRRRTLYEVM 116

Query: 128 GSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFGQQRSSED 187
              A+ +   L+      A  YL +R +     ++FG+GY A E   ++   G++  S  
Sbjct: 117 ALAAKHFEATLQSRLGAKARGYLADREIGPATQKRFGLGYAAGERFNLKEALGKEGVSVA 176

Query: 188 MLVTAGMLIENDN-GRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTP-KYLNSPETPI 245
            +V AG+LI  ++    YDRFR RVMFPI D +GRV+ FGGR  E+  P KYLNSPETP+
Sbjct: 177 DMVEAGLLIAGEDIPVPYDRFRDRVMFPITDLKGRVVAFGGRALEKDVPAKYLNSPETPL 236

Query: 246 FHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDHLQLLF 305
           FHKG  LY  +    A +   +++ VEGY+DV+A+ + G   +VA LGT+ T + LQLL+
Sbjct: 237 FHKGSLLYNGFSARTAAQTGARVIAVEGYVDVIAMVEAGFGGAVAPLGTALTEEQLQLLW 296

Query: 306 RQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRKYGKADF 365
           R +   +  +DGD+AGR AA RA++ AL +LK+G  L F  LP+G+DPD  +R+ G+   
Sbjct: 297 RMSEEPLLLFDGDKAGRRAAHRAIDLALPHLKAGRSLSFAALPEGQDPDDLIRRSGREAM 356

Query: 366 EQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPD 413
           EQ +A A PL+  L+    E    +L + E ++AL      +++ I D
Sbjct: 357 EQVLAQARPLAAELWAR--ESENASLETPERRAALEGRLNEVVNAIGD 402