Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., DNA primase DnaG from Variovorax sp. SCN45

 Score =  366 bits (939), Expect = e-105
 Identities = 197/424 (46%), Positives = 267/424 (62%), Gaps = 17/424 (4%)

Query: 5   IPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYHCFGC 64
           IP SFI +L+AR D+V+++   V LKK G N+   CPFH EK+PSFSVS  KQFYHCFGC
Sbjct: 9   IPASFIQELIARADVVEIVGRYVPLKKAGANFMGLCPFHGEKSPSFSVSPTKQFYHCFGC 68

Query: 65  GAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDKRSLY 124
           G HGNAI F+ME+  M F EA+ +LA   GL+V  ++   +SP  +   A + + + +L 
Sbjct: 69  GVHGNAIGFLMEHAGMGFVEAVHDLADQYGLQVPEDD---ASPAERARAASQRQKQATLT 125

Query: 125 DLMGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFGQQRS 184
           D++      YR+ L+      AIEYLK RG+SGE+ ++FGIGY    W  +   F     
Sbjct: 126 DVLEKAGDAYRKHLRQAPG--AIEYLKGRGVSGEVAKQFGIGYAPAGWRALASVFPDY-- 181

Query: 185 SEDMLVTAGMLIEN--------DNGRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPK 236
            + +L  +G++I N        +  +RYDRFR RVMFPIR+ +G  IGFGGR+     PK
Sbjct: 182 DDPLLTESGLVIVNNEEGKLSDEEAKRYDRFRDRVMFPIRNVKGECIGFGGRVLGDEKPK 241

Query: 237 YLNSPETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTST 296
           YLNSPETP+F KG+ELYGLYE   A+R+    LV EGYMDVVALAQ G   +VA+LGT+ 
Sbjct: 242 YLNSPETPVFSKGRELYGLYEARAAFRDRGYALVTEGYMDVVALAQLGFPNAVATLGTAC 301

Query: 297 TGDHLQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSY 356
           T +H+Q LFR T  V+  +DGD AGR AA +AL+ AL Y      +KFLFLP   DPDS+
Sbjct: 302 TSEHVQKLFRFTESVVFSFDGDAAGRRAARKALDGALPYATDVRSIKFLFLPAEHDPDSF 361

Query: 357 VRKYGKADFEQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPDPFL 416
           +R++G   F + V  ATPLS+++ E   E    +L + EG++ + +   PL   +PD  L
Sbjct: 362 IREHGAEAFARFVTEATPLSRFMLEAARE--GCDLTTAEGRAHMTSNVRPLWSAMPDGAL 419

Query: 417 QEIL 420
           +  L
Sbjct: 420 KRQL 423