Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., DNA primase DnaG from Sphingobium sp. HT1-2

 Score =  322 bits (824), Expect = 4e-92
 Identities = 185/423 (43%), Positives = 250/423 (59%), Gaps = 20/423 (4%)

Query: 9   FIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYHCFGCGAHG 68
           ++D+L AR  +  +I   VK++K G+ Y ACCPFHNEKTPSF+++ EK FYHCFGCGAHG
Sbjct: 7   WLDELRARTSLSTLIGKTVKVQKAGREYKACCPFHNEKTPSFTINDEKGFYHCFGCGAHG 66

Query: 69  NAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDKRSLYDLMG 128
           +AI ++ +   + F EA++ELA+T G+EV         P A    A ++E  + L+D MG
Sbjct: 67  DAIRWMTDQRGLPFMEAVKELAATAGMEV---------PAADPRAAKRAEQAKGLHDAMG 117

Query: 129 SIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVR---RNFGQQRSS 185
           +   F+  QL       A  YL  RG+S    + FG GY  D    ++   + FG     
Sbjct: 118 AAQSFFEDQLGGIDGGDARAYLAKRGISDATRRTFGFGYSPDSRGKLKGALKEFG----- 172

Query: 186 EDMLVTAGMLIENDNGR-RYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPKYLNSPETP 244
           E MLV AG+LI+ D  R  YDRFRGR+M PIRD RGRVI FGGRI  QG PKYLNSP+TP
Sbjct: 173 EPMLVEAGLLIDPDGERDTYDRFRGRLMLPIRDIRGRVIAFGGRIIGQGEPKYLNSPDTP 232

Query: 245 IFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDHLQLL 304
           +F KG+ LY +     A R+  +++VVEGYMDV+ALAQ G   SVA LGT+ T   ++ L
Sbjct: 233 LFDKGRTLYNIDRASPASRQSGRVIVVEGYMDVIALAQAGFGDSVAPLGTALTEHQIERL 292

Query: 305 FRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRKYGKAD 364
           ++     I C+DGD AG+ AA RA   AL  L+ G+ L F  LP G+DPD  +R  G   
Sbjct: 293 WKMVEVPILCFDGDAAGQKAAIRAATRALPLLRPGHSLAFATLPAGQDPDDLLRAEGPRA 352

Query: 365 FEQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPDPFLQEILEKLL 424
            +  +A A PL   L+E+  E     L + E K+AL+       D I  P ++ +  +  
Sbjct: 353 MDAVLAGAQPLVDRLWEH--EQKVGPLDTPEQKAALKQRLAAHSDSIQHPDVRALYAQAF 410

Query: 425 DER 427
            ER
Sbjct: 411 RER 413