Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., DNA primase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  286 bits (731), Expect = 2e-81
 Identities = 156/370 (42%), Positives = 222/370 (60%), Gaps = 16/370 (4%)

Query: 5   IPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYHCFGC 64
           IP+  +D +LA+ DI +V+   V LKKKG+N  ACCPFH+EK+PSFSVS  K  Y CFGC
Sbjct: 4   IPKEVVDQVLAQADITEVVGDFVSLKKKGQNMWACCPFHHEKSPSFSVSPAKGIYKCFGC 63

Query: 65  GAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDKRSLY 124
           G  GN++ F+M+ E   FPEAI+ LA    +EV  E+  P         A +  ++ SL+
Sbjct: 64  GKAGNSVQFIMDVEGTSFPEAIKYLAKKYSIEVPEEQHDPEY-------AREQSERDSLF 116

Query: 125 DLMGSIAQFYRQQLKVPANKHAI--EYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFGQQ 182
            +    A+ ++Q+L     + AI   YLK RGLS   ++KF +GY  DEW  +     + 
Sbjct: 117 IVSDFAAKHFQQRL-TSHEQGAIGQSYLKQRGLSSNTIRKFELGYSLDEWTDLTDAALKV 175

Query: 183 RSSEDMLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRI---TEQGTPKYLN 239
              +  L   G+ I  ++G++YDRFRGRVMFPI +  GRV+GFG R     ++ +PKYLN
Sbjct: 176 GYKQKYLEATGLTIAREDGKKYDRFRGRVMFPIHNVSGRVVGFGARTLKSNDKKSPKYLN 235

Query: 240 SPETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGD 299
           SPE+ I+HK   LYGL++  QA R      +VEGY+DV++L Q G++  VAS GTS T  
Sbjct: 236 SPESDIYHKSNVLYGLFQAKQAMRMQDMCYMVEGYLDVLSLHQGGIENVVASSGTSLTEG 295

Query: 300 HLQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRK 359
            ++L+ R T ++   YDGD AG  A+ R ++  L    + N++ F   P GEDPDSY+ K
Sbjct: 296 QIKLISRYTENITVLYDGDAAGIKASLRGIDLILELGLNVNVVTF---PAGEDPDSYIHK 352

Query: 360 YGKADFEQQV 369
            G   F+  +
Sbjct: 353 VGDTAFKTYI 362